Paludibaculum fermentans: IRI77_06375
Help
Entry
IRI77_06375 CDS
T06895
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00750
Vitamin B6 metabolism
pfer01100
Metabolic pathways
pfer01240
Biosynthesis of cofactors
Module
pfer_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
IRI77_06375 (pdxS)
Enzymes [BR:
pfer01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
IRI77_06375 (pdxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
Med22
NMO
Motif
Other DBs
NCBI-ProteinID:
QOY89575
UniProt:
A0A7S7SN05
LinkDB
All DBs
Position
complement(1616048..1616935)
Genome browser
AA seq
295 aa
AA seq
DB search
MMYLDEAFRVKVGLAEMLKGGVIMDVTDAKQAEIAEKAGACAVMALERVPSDIRKEGGVA
RMAAISKIREIMANTSIPVMAKVRIGHFAEARVLEALEVDYIDESEVLTPADEEHHVWKR
DFKVPFVCGCRNLGEALRRIAEGAAMIRTKGEAGSGNIVEAVRHMRTIVKEMKQLTVLGQ
EELVAESKKHQAPLELIQYVHDNGKLPVPNFSAGGIATPADAALARLLGAEAVFVGSGIF
KSSDPETRAKAIVKANTHYNEPLAVLEASEELGDAMPGLDIRQMAEGDLMQTRGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatctcgacgaagctttccgcgtgaaagtcggcctggccgaaatgctcaagggc
ggcgtgatcatggacgtgacggatgccaagcaggctgaaatcgccgaaaaggccggcgcc
tgcgcggtgatggcgctggaacgtgtcccgtcggacatccgcaaggaaggcggcgtggcg
cgcatggcggcgatcagcaagatccgcgagatcatggcgaacaccagcatcccggtgatg
gccaaggtccgcatcggccactttgcggaagcgcgggtcctggaggccctggaagtcgac
tacatcgacgagagcgaggtgctgactccggccgacgaagagcaccatgtctggaaacgc
gacttcaaggtgccctttgtctgcggctgccgcaacctgggcgaagcgctgcgccggatt
gccgaaggcgcggccatgatccgcaccaagggtgaagccggcagcggcaacattgtcgag
gccgtgcggcacatgcggacaatcgtcaaggaaatgaagcagttgacggtgctggggcag
gaagaactggtagccgagtcgaagaagcaccaggcgccgctcgagctcatccagtatgtc
cacgacaacggcaagctgccggtgccgaacttctccgcgggcggcattgcgactccggcg
gatgcggccctggcccgtctgttgggcgccgaggccgtgtttgtcggcagcggcatcttc
aagtcctccgatcccgaaacccgcgccaaggcgattgtgaaggccaacacccactacaac
gagcccctggccgtgctggaggcgagtgaagagctgggcgatgcgatgccgggtctcgat
atccgccagatggcggaaggcgacctgatgcagacgcgcggctggtaa
DBGET
integrated database retrieval system
