Paludibaculum fermentans: IRI77_08310
Help
Entry
IRI77_08310 CDS
T06895
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00550
Peptidoglycan biosynthesis
pfer01100
Metabolic pathways
pfer01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IRI77_08310 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IRI77_08310 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfer01011
]
IRI77_08310 (mrdA)
Enzymes [BR:
pfer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IRI77_08310 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfer01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IRI77_08310 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QOY89945
UniProt:
A0A7S7NUA2
LinkDB
All DBs
Position
2088939..2090840
Genome browser
AA seq
633 aa
AA seq
DB search
MKLIPQERQPDASVTRPLIRDDTKFAAGKIAVFQYFAVCVFVFLALGYWDLQVRNEEFYL
EKAYQNQIKSLPIPAPRGKIVDRDGRVIVDNHSSYRLILSRDSLREEHVIPIAAGLNLDA
NDLSAKIRRFRRQPTYFTIPLKEELTADELTFVEAHKGADSFPEMELIKSQFRVYPRDGV
AAHLLGYVGEINEPELNSQEWANHNPGDVIGKSGIERFYNEQLTGVDGQRQVRVDNRMNT
REVLGITEAQPGKDLKLTIDLDLQVVAELAMQNKRGAVVALDPRTGEVLAFVSTPAPDPN
HFVGRIDAKEWAALATDPYKPLFNRALAAQQAPGSTFKPIMALAALEAGIIDENFTVQCN
GGANWYGRWFKCHKKTGHGTVNLKTAIAQSCDVFFYAVGNKLGIDKIAEYAEMAGLGHKT
GIDLPGEKEGVVPSSKWKIRTQREKWYAGETISVSVGQGALTVTPLQLAHAIGGIATGGV
WMRPHVVKEEAGKAGKLEPARKAQLNLDNVNKVIAGMYAVVNEWGTGSMAHIPGIELCGK
TGTAQLASNDLLKSRDMGEAFRDNGWFVGFAPRNSPEIVVAALYENGAHGDRASWIVRDV
VKAYFDKKARLNKLQQPTPGVASLLSRPGEIAR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgattccgcaggaacggcagcccgatgcgtcggtcacccgcccactgatccgc
gacgacacgaaattcgccgccggcaagatcgcggtattccagtacttcgctgtctgcgtt
ttcgtctttctggccctgggttactgggacctgcaggtccgcaacgaggagttctacctc
gaaaaggcctaccagaaccagatcaagagcctgcccatccctgccccgcgtggaaagatt
gtcgatcgcgacggccgtgtcatcgtcgacaaccactcctcttaccggctcatcctctcg
cgcgacagcctgcgggaagagcatgtcattcccatcgccgcgggcctcaacctggacgcc
aacgatctctccgccaaaatccgccgcttccgccgccagccgacctacttcacgattccg
ttgaaggaagagctgaccgccgacgaactgacctttgtcgaagcccacaagggcgccgac
tcgttcccggagatggagctgatcaaatctcagttccgggtctaccccagggacggcgtg
gccgcgcacctgctggggtatgtgggtgaaatcaacgaacccgagctgaactcccaggag
tgggccaaccacaatcccggtgacgtcatcggcaagtcgggcatcgagcgcttctataat
gagcagctcaccggcgtggacggccagcggcaggtgcgtgtcgacaaccgcatgaacacc
agggaggttttagggattaccgaggcgcagcccggcaaggacctgaagctgaccatcgac
ctcgacctgcaggtggtggccgagctcgccatgcagaacaaacgcggcgccgtggtggct
ctggacccgcgtacaggtgaggtactggccttcgtctccacgcctgcgcccgaccccaac
cacttcgtcggacgcatcgatgccaaggagtgggccgcgctggcaaccgacccgtataag
ccgctgttcaaccgcgcgctcgcggcccagcaggcgcccggatcgacattcaaacccatc
atggcgctggccgcgctcgaggccggcatcatcgacgagaacttcacggttcagtgcaac
ggcggcgccaactggtatggccgctggttcaaatgccacaaaaaaaccggccacggcacg
gtaaatctgaaaaccgccatcgcgcagagctgcgacgtcttcttctatgcggtgggcaat
aaactgggcatcgacaagatcgcagagtatgccgagatggccggcctgggccacaagacc
ggcatcgacctgccgggtgagaaggaaggcgtcgtgccctcctcaaagtggaagatccgc
acgcagcgggaaaaatggtacgccggtgagaccatctccgtttcggtgggccagggcgcg
ctgaccgtcactccgctgcaactcgctcacgccattggcggaattgccacgggcggagtc
tggatgcggccgcacgtggtcaaggaagaggcgggcaaggcaggcaagctggaaccggcc
cgcaaggcgcagctcaatctggacaatgtaaacaaggtgatcgccggcatgtatgccgtg
gtgaacgagtggggtacggggtccatggcgcacatcccggggatcgagctttgcggcaag
accggcaccgcccaattggcttcgaatgatctgttgaagagccgcgacatgggtgaagcg
ttccgggataacggctggtttgtcggcttcgccccgcgcaactccccagagattgtggtg
gctgctttgtatgagaacggcgcccacggcgacagggcttcgtggattgtgcgcgacgtc
gtaaaagcgtatttcgacaagaaggcacggttgaacaaactgcagcagcccacgcccggc
gtggccagcctgctcagccggcccggggagattgcccgctag
DBGET
integrated database retrieval system
