Paludibaculum fermentans: IRI77_09420
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Entry
IRI77_09420 CDS
T06895
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00521
Streptomycin biosynthesis
pfer00523
Polyketide sugar unit biosynthesis
pfer00525
Acarbose and validamycin biosynthesis
pfer00541
Biosynthesis of various nucleotide sugars
pfer01100
Metabolic pathways
pfer01110
Biosynthesis of secondary metabolites
pfer01250
Biosynthesis of nucleotide sugars
Module
pfer_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IRI77_09420
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IRI77_09420
01055 Biosynthesis of vancomycin group antibiotics
IRI77_09420
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IRI77_09420
00525 Acarbose and validamycin biosynthesis
IRI77_09420
Enzymes [BR:
pfer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IRI77_09420
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
NAD_binding_10
Tissue_fac
Motif
Other DBs
NCBI-ProteinID:
QOY90152
UniProt:
A0A7S7NUN9
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All DBs
Position
complement(2384187..2385116)
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AA seq
309 aa
AA seq
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MRYLVAGAAGFVGSHLCDRLIAEGHEVCAVDNFITGAERNIAHLKSRPRFQFIHHDVIQP
IHVDGPLDYVLNLASPASPKDYLDHPVETLRVGSEGTRNLLELALEKDAGFLLTSTSECY
GDPLEHPQKETYWGNVNPIGPRSCYDESKRFAEAVTMAYHRTHGVRTTIARIFNTYGPRM
HLNDGRIVPAFIDQALRNAPMTVFGTGAQTRSFCYVSDLVDGLLRLAHSSERLPVNLGNP
VELTVLEFAERIRVLTGATSQLVFEPLPQDDPQRRRPDITKANQVLGWQPQVGLDEGLTY
TIEYFRVPV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttatctcgtagcgggagctgccggatttgtcggttcccatttgtgcgatcgattg
atcgctgaaggccacgaagtttgcgccgtagacaatttcatcaccggggcggagcgcaac
atcgctcatctgaaaagccgaccccgtttccagtttattcatcatgatgtaatccagccg
atccacgtggatgggccactggactacgtcctaaacctcgcgtctccggctagccctaag
gattacctggaccatcccgtggaaaccctgcgagttggctcggaggggacgcggaatctg
cttgagctcgcgttggaaaaggatgccggatttctactgacatccacctcggagtgctac
ggtgacccactggagcatccgcagaaggagacctactggggcaacgtcaatccgattggc
ccccgatcgtgttacgacgagagcaaacggtttgcggaagccgtgaccatggcgtatcac
agaacgcatggcgttcgtactacaattgcccgcatcttcaatacctacgggccgcgcatg
cacttgaacgatggccgcatcgtgcccgctttcatcgaccaggcgctacgcaatgcgccg
atgaccgtgttcgggaccggagctcagacgcgcagcttctgctatgtgagcgacctggtg
gacggcctgctgcggctggctcattcttccgagcggctgcctgtcaatttaggcaacccg
gtagaactgacagtgctggagttcgctgagcggattagagtccttaccggcgccacgtcg
cagcttgttttcgagccgttgccgcaggacgacccccagcggcggcgtccggatatcacc
aaggccaaccaggtgctgggctggcagccgcaagtcgggctggacgaaggcctgacgtat
acgattgaatacttccgcgttccggtataa
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