Paludibaculum fermentans: IRI77_09815
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Entry
IRI77_09815 CDS
T06895
Symbol
hscA
Name
(GenBank) Fe-S protein assembly chaperone HscA
KO
K04043
molecular chaperone DnaK
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IRI77_09815 (hscA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfer03019
]
IRI77_09815 (hscA)
03110 Chaperones and folding catalysts [BR:
pfer03110
]
IRI77_09815 (hscA)
03029 Mitochondrial biogenesis [BR:
pfer03029
]
IRI77_09815 (hscA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfer04147
]
IRI77_09815 (hscA)
Messenger RNA biogenesis [BR:
pfer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IRI77_09815 (hscA)
Chaperones and folding catalysts [BR:
pfer03110
]
Heat shock proteins
HSP70 / DNAK
IRI77_09815 (hscA)
Mitochondrial biogenesis [BR:
pfer03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
IRI77_09815 (hscA)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
IRI77_09815 (hscA)
Exosome [BR:
pfer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IRI77_09815 (hscA)
Exosomal proteins of breast cancer cells
IRI77_09815 (hscA)
Exosomal proteins of colorectal cancer cells
IRI77_09815 (hscA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DMRL_synthase
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
QOY90227
UniProt:
A0A7S7NUU2
LinkDB
All DBs
Position
2503191..2505041
Genome browser
AA seq
616 aa
AA seq
DB search
MSTFQIDFSNINRKRIVGIDLGTTNSLVAFMDLTGPQVIPGADGSVLVPSIVSLADDGSF
VVGDAARQLLIDRSDRTVYSVKRLMGRGAADVQEETSLFPFRIAEGSEQVIRLALGGRQF
TPPEISAQVLRELKQRAEAYLGEEVTQAVITVPAYFNDAQRQATKDAGRIAGLEVLRLVN
EPTAASLAYGLDKRNDGVVAVYDLGGGTFDISILRLHEGIFEVLATNGDTHLGGDDIDNR
LLAIALEEIASEWGEDISRNGEAVQTVRRAVIEAKERLSFLPLTAIDVDFKGRKYQREMT
REIFEQIIKDIVDRTLGPCRQAMRDAGLEPEGIDEVVMVGGSTRIPLVRSAVSTLFRAKP
HTELNPDEVVALGAAVQAAILSGDVQDKLLLDVTPLSLGIETMGGVVSKLIHRNSTIPAS
ATEVFTTSVDGQQNVLIHVLQGERELVKDCRSLARFDLKGIDPMPAGMARIEVRFLIDAN
GILSVSARDLRSGTEQSVEVKPSYGLTDEQVEAMILESYEKAEEDFAARQVREARVEADT
ILSAVDKARASDAWIDLTDEERSAVDLALNELQMVYHGEDHTLIRNRIENLDGSTRKLAE
NMMNTAVRAALKGTKI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttttcaaatcgacttctccaacatcaacaggaagcgcattgtcggcatcgac
ctgggcaccaccaattctctcgtggccttcatggacctgacgggcccgcaggtcattcca
ggcgccgacggcagtgtgctcgtgcccagtattgtcagtctggccgatgacggtagtttc
gtggtgggcgacgccgcgcggcaactgctgatcgaccggtcggaccgtaccgtctactcc
gtgaagcgcctgatgggccgaggagccgccgatgttcaggaagagaccagccttttcccg
ttccggatcgctgagggcagcgagcaggtcatccgcctcgccctggggggccgccagttc
actccgccggagatttcagcccaggtgttgcgggaactgaagcagcgcgctgaggcctat
ctcggagaagaggtgacgcaggcggtcatcaccgtcccggcctacttcaacgatgcgcag
cggcaggcgaccaaggatgccggccgcatcgctggcctggaagtgctgcgcctggtgaac
gaacccacggcggcgtcgctggcttacgggctggacaagcgcaacgacggcgtggtggcg
gtctatgatctcggcggcggcacgttcgacatttcgatcctgcgcctgcacgaaggcatc
ttcgaggtgttggccacgaacggtgacacccacctgggcggcgacgatatcgacaaccgc
ctgctggccattgccctggaagagatcgcctccgagtggggcgaggatatttcacggaat
ggcgaagcggtgcaaaccgtgcgccgcgccgtcatcgaagccaaagagcggctgtcgttc
ctgccgctgacggcgatcgatgtcgacttcaagggccgcaagtatcagcgcgaaatgacg
cgcgagatcttcgagcagatcatcaaggacattgtggaccgcacgttgggtccgtgccgc
caggcgatgcgcgacgccggcctggagcctgagggcatcgacgaagtggtcatggtgggc
ggctcgacccgcatcccgctggtgcgctcggcggtctcgacgctgttccgcgccaaaccg
cacactgaactgaatcccgacgaagtagtcgcgttgggcgccgccgtgcaggctgccatt
ctctccggagacgtgcaggacaagctgctgctcgacgtgacgcctttgtccctgggcatc
gagacgatgggcggggtcgtcagcaagctcatccatcgcaactcgaccattccggcctcc
gccaccgaagtgttcacgacctcagtggacggccagcagaacgtgctcattcatgtgctg
cagggcgaacgcgaactggtaaaggattgccggtcgctggcgcgcttcgacctgaagggt
atcgatcccatgccagcgggcatggcccggatcgaggtacggttcctcatcgacgccaac
ggcatcctcagcgtcagcgcacgcgacctgcgcagcggcaccgagcagagcgtggaagtg
aagccatcctacggcctcaccgacgagcaggtggaagcgatgatcctcgaatcgtacgag
aaggcggaggaagacttcgctgcccggcaggtacgagaggctcgcgtggaagcggacacc
atcctgtcggcggtggacaaggcccgcgccagcgacgcctggattgacctgaccgacgag
gaacggtccgccgtggatctggcgctcaacgaactgcagatggtgtatcacggcgaggat
cacaccctgatccgcaaccgcattgagaacctggatggctccacgcgcaagctggccgag
aacatgatgaacaccgccgtccgcgcggcgctgaaggggaccaagatctag
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