Paludibaculum fermentans: IRI77_11725
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Entry
IRI77_11725 CDS
T06895
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
IRI77_11725
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Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_YknX
Beta-barrel_RND
HH_MFP_RND
YknX_C
Biotin_lipoyl
BSH_CusB
RND-MFP_C
Beta-barrel_AprE
CzcB_C
TSX
AUX_IAA
Motif
Other DBs
NCBI-ProteinID:
QOY90581
UniProt:
A0A7S7NVN5
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Position
complement(2995326..2996867)
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AA seq
513 aa
AA seq
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MIRLFVSLPHAVTARLHSPTALPPAVTRASTRKDPRHTPVIGLERAHQSISMQRKSVVLL
ALGSCVLAGLGAWAYLRGSGSTQFRTAAVEHGDINVAISATGSPNAVVTVQIGSQVSGTI
QSLYADFNTKVTKGQLIARIDPAALQARVDQGQASLDSARAGVANAEAGILKAQAGIQAA
RSSAAASVANGIKTQVAAQDAKIKAGRRVQLAEQGLLSKEDVDTAQAAYSTAVAEHDATT
AQQSEAGDNVKVAQAELKVSNTQLAASQAQVNQFQAALRSTQIDLDHTFIKAPVDGVVVS
RKVDVGQTVAASLATPTLFEIAQDLTKMQVDTNVSEADVGRVRVGQPGTFTVDAYPGQVF
KGAVTEIRKAPINVQNVITYDVVIGVSNPDLKLFPGMTANVRILVNQRPNVLKVLNAALR
YHPSSEQTVQPRAGKSGRKGVQVQQAVWVLDSKGKQQRIPVTTGESDGTYTEITKGELKD
GDLVIVAELAKSAPASSGSPVSSGSKGGRGPGF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgcttgtttgtcagtctgccccatgcggtaactgcccgcctccattcccccacc
gcgctgccgccggccgtcactcgcgcctccacccgcaaggacccccggcacacccccgtc
attggcctcgaacgtgcccatcaatccatcagcatgcagaggaaatcagttgtgttgctc
gcgctcggctcctgcgtcctggccggcttgggcgcctgggcgtatctccgcgggagcggc
agcactcagttccgcacggccgcggtcgaacatggcgatatcaacgtcgccatctccgcc
accggcagtcccaacgcggtcgtcaccgtacaaatcggatcgcaggtctcaggcacaatc
caatctctctacgccgacttcaacacgaaggtgacgaaaggccagttgatcgcccgcatc
gatcccgcggccctccaggccagggtcgatcagggccaggcgagcctcgattccgcccgt
gccggtgtggccaacgccgaggccggcatcctgaaagcacaggcaggcatccaggccgca
aggtcgtccgcggccgcctctgtcgccaatggcatcaaaacacaagtcgccgcacaggac
gcgaaaatcaaggccggccggcgcgtgcagttggcggaacagggccttctatccaaggaa
gacgtagataccgcccaggccgcctacagcacggccgtcgccgagcacgacgccaccacc
gcccagcaaagcgaggcgggcgacaacgtcaaggtcgcccaggccgagttgaaagtgtcg
aatacgcagctcgcggccagccaggcgcaagtgaatcagttccaggccgcgctgcgttcc
acccagatcgatctggaccacaccttcatcaaggcgcctgtcgacggagtagtcgtgtcc
aggaaagtcgacgtcggtcaaaccgttgcggccagcctcgccactcctaccctgttcgaa
attgcgcaggacctcaccaagatgcaggtcgataccaacgtgtcggaagccgatgtcggc
cgcgtgcgcgtgggccagccaggaaccttcaccgtggacgcctatcccggccaagtcttc
aaaggcgcggtgactgagattcgaaaggcccccatcaacgtgcagaacgtcatcacctat
gacgtcgtcatcggagtctcaaaccccgacttgaagctcttcccgggcatgacggccaac
gtcaggattctcgtgaaccagcgccccaacgtgttgaaggttctcaatgcggcgctcagg
taccatccgtcatccgagcaaacggtgcagcctcgtgccggcaagtcaggacgcaaggga
gtccaggtgcaacaggctgtttgggtcctcgactccaaaggtaaacaacagcgtatcccc
gtcacgacgggcgagagcgatggaacctatacggagatcactaagggcgaactgaaggac
ggagacctcgtcatcgtggcggaactggccaagtccgcgcctgcctccagcggcagcccc
gtttccagcggcagcaagggcggccgcggtccgggcttctag
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