Paludibaculum fermentans: IRI77_16220
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Entry
IRI77_16220 CDS
T06895
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IRI77_16220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfer03032
]
IRI77_16220
Enzymes [BR:
pfer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IRI77_16220
DNA replication proteins [BR:
pfer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
IRI77_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
RNase_H_2
DNA_pol_B_exo1
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
QOY91431
UniProt:
A0A7S7SPB7
LinkDB
All DBs
Position
complement(4152060..4154447)
Genome browser
AA seq
795 aa
AA seq
DB search
MHSESAEHRDKAGQSQDEWLWGWDPTPGIVSVWAENDGWALVWRRLPETGQLVRERVRFR
PWLLLDRLDDLLHVGDRLGLAGSADALIEYRVLDGPGELRFLVSAEDGRTLSSALLHGAS
QRLGKRIGHLRDLGHDTVLSLSPEEQYLVATGRTYFRDLPFDKLRRMQFDLETTGLSPES
CRIFMISVRAPSGATQVLEARDDSDEAEAELIRQLVAVVQAEDPDVIENHNLHGFDLPFL
DTRAERLGVVLALGRIGSGGLRQRAARRGTASEGDARRRVRFIAPGRELIDTLDAVLRYD
FATRELPGHGLKAVARHLGIAKEDREYIPGDRIHEVYQRDPERVRRYATSDVEEVAEVAR
MLGGAAFALARMAPRRYERLADAGAATGVLDPLLVRAYLRAGMALPAHQAGDGTPHQGAA
LHLFASGVARRIVKADVASLYPSLMRAFRIGPKRDHLGALLAIVDRLVERRLAAKAAAKA
AAAGSVERYTQEALSAAMKLVVNTAYGYMAAGGTLTRFADVHAANEVTRRGRATLDLMCR
ELAARGVTLLEADTDGVYFAVPESWTEADERRTVDEVAALLPPLVHLEFEGRYAAMLSHE
PKNYALLTYGGKLLLKGVAFRSSRAEPYGETFLRRAIERLLAGDIPGVRDVYLATLDALR
RRELPTYEVSSFVRLTKSPAKYLETRDSRRELAYEAMLASGRTAWSVGDKVRVYRAKGGS
GGVVESPEHAAYAADGPDRRDYDADHYSRLLRDTFASRLARAFTPADYAAVFADPGQLSL
FAPSLDTIHSVLNRQ
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtgagtcggcagagcatcgtgataaggccggccaatcgcaggacgaatggctg
tggggctgggaccccacgccaggcatcgtttccgtgtgggcggagaacgacggatgggcg
ctggtgtggcggcggctgcccgagaccggccaattggtgcgcgagcgggtccggttccgg
ccctggctgctgctggaccggttggacgatctgctgcatgtcggggaccggctggggctg
gcggggtcggcggatgccctgatcgaatatcgagtgctggatgggccgggggaactgaga
ttcctggtgtccgcagaagacgggcgtaccctttcctcggcgctgctgcacggggcttca
caacggctggggaagcgcattgggcacctgcgggacctgggccacgatacggttctgtcg
ctgtcgccggaggagcagtatctggtggccaccgggcggacgtatttccgcgacctgccc
ttcgacaagctgcgccggatgcagtttgacctggagacgaccggcctttcccccgagagc
tgccgcatcttcatgatctccgtgcgcgcgccgtccggggcgacgcaggtgcttgaggct
cgtgacgacagcgatgaagcggaagcggaactgatccggcagttggtggcggtggtgcag
gccgaggatccggatgtgatcgagaaccacaacctgcatgggttcgacctgccgtttctg
gatacgcgggcggagcggctgggcgtggtgctggccttgggccgcatcggctcgggcggg
ctgcggcaaagggcggcgcggcggggtacggcgagtgagggagatgcgcggcggcgggtt
cgtttcatcgctccggggcgggagttgatcgatacgctggacgcggtgctgcgttacgac
ttcgcgacacgcgaactgccggggcacggcctgaaggcggtggcgcggcacctgggcatc
gccaaagaggaccgtgagtacattcccggcgaccggatccacgaggtgtaccagcgcgat
ccggagcgggtgcgccgctatgcgacctctgatgtggaggaggtggccgaagtggcgcgg
atgctgggcggggcggcgtttgcgttggcgaggatggctccgcggcggtatgagcgcctg
gcggacgcgggcgcggccacgggtgtcctggatccgctgctggtgcgggcttacctgcgg
gcgggcatggcgctgccggcgcatcaggcgggcgacgggactccgcaccagggggcggcg
ctacacctgttcgccagcggcgtggcgcgccgcattgtgaaggcggatgtggccagcctg
tacccttcgttgatgcgggctttccggattggtccgaagcgcgatcacctgggcgcgctg
ctggcgattgtcgaccggctggtggagcggcggctggcggccaaggcggcggcgaaggcc
gcggctgccggctcagttgaacggtacacgcaggaggctctctcggccgcgatgaagctg
gtcgtgaacaccgcttacggctacatggcggcaggcgggacattgacgcgattcgccgat
gtgcatgcggccaatgaagtgacgcgccgaggccgggcaacgctggacctgatgtgccgg
gaactggccgcgcgcggggtgacgctgctggaggcggacacggacggcgtctattttgcc
gtgccggagagttggaccgaggcggatgagcggcggacggtggatgaagtggccgcgctg
ttgccgccgctggtccacctggagttcgagggccgctatgcggcgatgctgtcgcacgag
ccgaagaattacgcgctgctgacatatggagggaaactgctgctaaaaggcgtcgcgttc
cggtccagccgcgcggagccctatggcgagacgttcctgcgccgcgcgattgagaggctg
ctggccggcgacattccgggtgtccgcgatgtgtacctggcgaccctggatgcgctgcgc
cggcgcgagctgcctacatacgaagtgtcctccttcgtccgcctgacgaagtcgccggct
aagtatctggagacgagggacagccggcgggagttggcttacgaagcgatgctggcgagc
ggacgtacggcctggagtgtgggtgacaaggtacgggtttaccgcgcgaagggcggttcc
ggcggagtggtggaatcgccggagcacgcggcctacgcggcggatggcccggaccgtcgg
gactacgacgccgatcactattcacggctgctgcgcgatactttcgcgtcgcggctggcg
cgggccttcactccagccgactatgcggcggtctttgcggatcccgggcaattgtcattg
tttgcgccgtcgctggacacgatccacagcgtgctgaaccggcagtag
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