Paludibaculum fermentans: IRI77_18585
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Entry
IRI77_18585 CDS
T06895
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00300
Lysine biosynthesis
pfer00470
D-Amino acid metabolism
pfer01100
Metabolic pathways
pfer01110
Biosynthesis of secondary metabolites
pfer01120
Microbial metabolism in diverse environments
pfer01230
Biosynthesis of amino acids
Module
pfer_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IRI77_18585 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IRI77_18585 (lysA)
Enzymes [BR:
pfer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IRI77_18585 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QOY84873
UniProt:
A0A7S7NJN8
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Position
4741889..4743136
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AA seq
415 aa
AA seq
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MFQPFEYREGVLYCEGVELSKIADHAATPCYVYSARAILDRFHSYDQGLFGIPHRVCYAV
KANSNLSLLNMLAQAGAGFDIVSGGELHRVLKAGGDPGKVVFSGVGKTREEIDSALQLGI
HSFNCESEAEIALISSLASRLGKTASIALRVNPDVDAATHPYISTGLKEHKFGIDIAEVE
GVYQRAAALPGISLDGVSCHIGSQLLDPAPLLEAATKMLALVGRLRAKGIAIKELDLGGG
LGVPYHAGDPRPDVDTFLRKIRQLVDGHNLFLMFEPGRSVVAEAGALVSRVLYRKKNGEK
EFVIIDASMTELIRPALYEAHHEILPLRKSKFGTVVANIVGPVCESGDFLAENREVANVL
PGDLIAIMTAGAYGFAMASNYNSRVRPCEILVEGDTWRVIRQRETLDDLIRGEEL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaccgttcgaataccgcgaaggtgtcctctactgcgagggcgtggagctgtcc
aaaatcgccgaccacgccgccacgccctgctacgtctattcggcgcgcgccatcctcgat
cgcttccactcctacgaccaaggcctcttcggcatcccccaccgcgtctgctacgccgtc
aaggccaacagcaacctgagcctgctgaacatgctcgcccaggccggcgcgggcttcgac
atcgtctccggtggggaactgcaccgcgtcctcaaggccggcggcgaccccggtaaagtc
gtcttctccggcgtcggcaaaacccgcgaggagatcgactccgccctccagctcggcatc
cacagcttcaactgcgagagcgaagccgaaatcgccctcatcagctccctcgcctcgcgc
ctgggcaagaccgcgtccatcgccctgcgcgtcaatcccgacgtcgacgccgccacccac
ccctatatctccaccggcctgaaggagcacaagttcggcatcgacatcgccgaagtcgag
ggcgtctaccagcgcgccgccgcgctgccaggcatctcgctcgacggcgtgagctgccac
atcggctcccagttgctcgaccccgccccgctgctggaagccgccaccaagatgctcgcc
ctggtcggccgcctgcgcgccaagggcattgccatcaaggagttggatctcggcggcgga
ctgggcgtgccctaccatgccggcgatccgcgccccgacgtcgacaccttcctgcgcaag
atccgccagctcgtcgacggtcacaacctgttcctgatgttcgaacccggccgctccgtc
gtcgccgaggccggtgcgctcgtctcccgcgtgctctaccgcaagaagaacggggaaaag
gagttcgtcatcatcgacgcctccatgaccgaactcatccgtccggccctctacgaggcc
caccacgagatcctgcccttgcggaagtcgaagttcggcaccgtggtcgcgaacatcgtc
ggacccgtctgcgaaagcggcgacttcctcgccgagaaccgcgaagtggccaatgtcctg
cccggtgacctgatcgccatcatgaccgccggagcctacggcttcgccatggcgtcgaac
tacaactcacgggtacggccgtgcgagattctggtcgagggagacacctggcgcgtcatt
cgccaacgcgagacgctggatgacctgattcgcggggaagaactctag
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