KEGG   Paludibaculum fermentans: IRI77_18585
Entry
IRI77_18585       CDS       T06895                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pfer  Paludibaculum fermentans
Pathway
pfer00300  Lysine biosynthesis
pfer00470  D-Amino acid metabolism
pfer01100  Metabolic pathways
pfer01110  Biosynthesis of secondary metabolites
pfer01120  Microbial metabolism in diverse environments
pfer01230  Biosynthesis of amino acids
Module
pfer_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfer00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    IRI77_18585 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    IRI77_18585 (lysA)
Enzymes [BR:pfer01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     IRI77_18585 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QOY84873
UniProt: A0A7S7NJN8
LinkDB
Position
4741889..4743136
AA seq 415 aa
MFQPFEYREGVLYCEGVELSKIADHAATPCYVYSARAILDRFHSYDQGLFGIPHRVCYAV
KANSNLSLLNMLAQAGAGFDIVSGGELHRVLKAGGDPGKVVFSGVGKTREEIDSALQLGI
HSFNCESEAEIALISSLASRLGKTASIALRVNPDVDAATHPYISTGLKEHKFGIDIAEVE
GVYQRAAALPGISLDGVSCHIGSQLLDPAPLLEAATKMLALVGRLRAKGIAIKELDLGGG
LGVPYHAGDPRPDVDTFLRKIRQLVDGHNLFLMFEPGRSVVAEAGALVSRVLYRKKNGEK
EFVIIDASMTELIRPALYEAHHEILPLRKSKFGTVVANIVGPVCESGDFLAENREVANVL
PGDLIAIMTAGAYGFAMASNYNSRVRPCEILVEGDTWRVIRQRETLDDLIRGEEL
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgtttcaaccgttcgaataccgcgaaggtgtcctctactgcgagggcgtggagctgtcc
aaaatcgccgaccacgccgccacgccctgctacgtctattcggcgcgcgccatcctcgat
cgcttccactcctacgaccaaggcctcttcggcatcccccaccgcgtctgctacgccgtc
aaggccaacagcaacctgagcctgctgaacatgctcgcccaggccggcgcgggcttcgac
atcgtctccggtggggaactgcaccgcgtcctcaaggccggcggcgaccccggtaaagtc
gtcttctccggcgtcggcaaaacccgcgaggagatcgactccgccctccagctcggcatc
cacagcttcaactgcgagagcgaagccgaaatcgccctcatcagctccctcgcctcgcgc
ctgggcaagaccgcgtccatcgccctgcgcgtcaatcccgacgtcgacgccgccacccac
ccctatatctccaccggcctgaaggagcacaagttcggcatcgacatcgccgaagtcgag
ggcgtctaccagcgcgccgccgcgctgccaggcatctcgctcgacggcgtgagctgccac
atcggctcccagttgctcgaccccgccccgctgctggaagccgccaccaagatgctcgcc
ctggtcggccgcctgcgcgccaagggcattgccatcaaggagttggatctcggcggcgga
ctgggcgtgccctaccatgccggcgatccgcgccccgacgtcgacaccttcctgcgcaag
atccgccagctcgtcgacggtcacaacctgttcctgatgttcgaacccggccgctccgtc
gtcgccgaggccggtgcgctcgtctcccgcgtgctctaccgcaagaagaacggggaaaag
gagttcgtcatcatcgacgcctccatgaccgaactcatccgtccggccctctacgaggcc
caccacgagatcctgcccttgcggaagtcgaagttcggcaccgtggtcgcgaacatcgtc
ggacccgtctgcgaaagcggcgacttcctcgccgagaaccgcgaagtggccaatgtcctg
cccggtgacctgatcgccatcatgaccgccggagcctacggcttcgccatggcgtcgaac
tacaactcacgggtacggccgtgcgagattctggtcgagggagacacctggcgcgtcatt
cgccaacgcgagacgctggatgacctgattcgcggggaagaactctag

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