Paludibaculum fermentans: IRI77_18870
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Entry
IRI77_18870 CDS
T06895
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_18870
Enzymes [BR:
pfer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IRI77_18870
DNA repair and recombination proteins [BR:
pfer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IRI77_18870
Prokaryotic type
IRI77_18870
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
BES1_N
Motif
Other DBs
NCBI-ProteinID:
QOY84922
UniProt:
A0A7S7SGK0
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All DBs
Position
4826771..4828192
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AA seq
473 aa
AA seq
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MAVTTKLEQRVRTLNAAPVRPSAEHVLYWSQMNRRVDSNHALAWAIQRANELKLPVLCYE
GLTCTYKMANDRLHTFLLEGVPEMARRLGRLGIGYCFYPRRRREDPNDVLYRLARKAACV
VTDDYPTFIAAGHNATVPAKLDVSFSAVDSSCVVPMNVLEKREYAAYTIRPKITRLLPEY
LEPCTVTKPQRAWTGTAPEWHVPLTAEEIPALVASCEIDHSVAPSISYMGGRLAAEKLLQ
HFLKNNLRRYARERNEPAAHATSDMSPYLHFGQISSLEIALAAAEYAQEHDLIASEFLEE
LIVRRELAFNYARHVENPGSLDNLPDWVKTTLGKHAADPRSPSYTLEEFERAETHDALWN
ACQTEMLLRGKIHGYYRMYWGKKIIEWSPTCQDALETMIHIHDRYALDGRDPNTYTNILW
CFGLHDRPWQERPIFGMIRYMNLEGMKRKTGVDAYLREIGHLQQTGKDPFRVR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtcacgacgaaacttgaacagcgggtgcggacgctcaatgccgcgccggtccgg
cccagcgcggagcatgtcctctactggtcccagatgaaccggcgcgtggactcgaatcac
gccctggcctgggccatccagcgcgcgaatgagctaaagctgccagtcctttgctatgag
ggactgacctgcacctacaaaatggcgaacgaccgcctgcacaccttcctgctcgaaggg
gtgccggagatggcgcggcgcctgggccggctcggcatcggctattgcttctatccgcgg
cggcggcgcgaagatccaaacgacgtgctgtaccggctggcccggaaggccgcgtgcgtg
gtgacggacgactacccgacgttcatcgcggccgggcacaatgccacggtgccggcgaag
ctggacgtttcgttcagcgcggtggattcgagctgcgtggtgccgatgaatgtgctggag
aagcgcgagtatgccgcgtataccatccggcccaagatcacccggctgctgccggagtat
ctggaaccgtgtacggtcacaaagccgcagcgcgcctggactggaactgctccggaatgg
cacgtgccgttgaccgcggaagagattccagccctggtagcgtcgtgcgagatcgatcac
tcggtggcgccatccatttcctatatgggcggccggctggccgctgagaagctgctgcag
cacttccttaagaacaatctgcggcgctatgcgcgggagcggaatgaacccgccgcgcat
gccacatccgacatgagcccgtatctgcactttgggcagatctcgtcactggagattgcg
ctggcggcggcggagtatgcgcaggagcacgatctcattgcctcggagtttctagaggaa
ctgatcgtgcggcgcgaactggcgttcaactacgcccggcatgtggagaatccaggctca
ctcgacaatctgcccgactgggtgaagaccacgctggggaagcatgcggcggatccgcgg
tcgccctcctacacgctggaagagtttgagcgcgccgagacgcatgacgcgctgtggaac
gcctgccagaccgagatgctgctgcgggggaagatccacggctactaccgcatgtactgg
ggcaagaagatcattgagtggtcgcccacctgccaggacgcgctggagacgatgatccac
atccacgaccgctatgcgctggacgggcgggaccccaatacgtatacgaacatcctgtgg
tgtttcgggctgcacgaccggccctggcaggagcggccgattttcggcatgatccggtat
atgaacctggaagggatgaagcgcaagacgggtgtcgacgcctatctgcgcgagatcggc
catttgcagcagacagggaaggacccgttccgggttcgatga
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