Paludibaculum fermentans: IRI77_20045
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Entry
IRI77_20045 CDS
T06895
Name
(GenBank) TonB-dependent receptor
Organism
pfer
Paludibaculum fermentans
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Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
fn3_3
CarbopepD_reg_2
Plug
SpaA
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
QOY85129
UniProt:
A0A7S7NKB1
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All DBs
Position
complement(5118382..5121693)
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AA seq
1103 aa
AA seq
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MLTLLAFAMIVSWSMPSWAQSLYGSVVGQVEDPSGAAIVQAAITLTNKGTGQVYEAKADE
GGRFTVSNVLPGDYDLKVSANGFRTQNRTDIRVSAAGISRTDIRMEVGAIAEQITVEASA
TALQTDKADTHTELNSKQVANLPLPGFRNYQSLINLVPGATPAGFQNSITDSPGRSLATN
INGTNKNNNVTRIDGAASVNLWLPHHAGYVMPAEMVDTVNVTTAAGDSDQGMAGGAAVTV
LTKSGTNQIHGSLFEYHDNQNLKAFNYFTKATATTPAAASALKKPLRIYNNYGGTIGGPI
KKNKLFYFYSFDGTRQRDGNQGTYSVPTAAMKNGDFSAISTVIYDPLTGSPDGTGRTAFA
GNKIPTSRMSPAALKIQNYYPAPNTNLSGYQSNYFAAAVPAFNRDYNDIKINYNMSDKQQ
IFGHYGIMKALVVGKNLFGDGVGPAPGADPGTGDTRVQNMSIGTNRVITTNLLFDGVIGY
QRQDQTVRGVDYGKDFSTTLGIPGIGGSDPRQQGFPNISINGYDGFGVPGWMPLTRVEEN
YTLSANLTWTKGKHNFRFGFNGVNYRMTHWQPELGAGPRGSFDFTGGPTSLAGGSTDNFN
GYSSFLLGQSNSVQKSFQYITMTPREFQFSWYAQDRWQISRKLTMTLGLRYELYPLMTRA
TGKGIERLDPETNLVYMGGRGNNPTGVGVTVSHKLISPTLGIAYRLDDKTVIRTGYGINF
DPLPFSRPLRGFYPLTINIAATAQGSEVAGTLEKGIPATPLPDLTSGVLPLPINADMRSP
YLGQIHRGYTQSWNFTIERKLPMDVLSTIAYVGTSSVHLLADRDINAGSPGDSAGASLRR
PYYAKFGRNLATNMWDGYLSSNYHSLQTSVRKSLSKGLMLQGAYTWSKAINMTDEDGWAS
VGFNWGPVFRRNRAAAGYDRTHVLQMGWVYELPMGKGKQFVTNGIGSKILGGWSVNGIMS
NYTGTPFTVSGSSGALNAASNTATADQVGSVTRIGAIGAGSTYYNTSAFANVTTTTTGGV
YRFGTSGRNILRAPGMWNTDLMVNRTFQITERITTAFRAEFYNLPNTSHFGGVSSGNVTS
GNFMRILSSSGERQIRFGLRLGF
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgctcctggctttcgccatgatcgtcagctggtccatgccgtcatgggcccaa
tccctttacgggtcggttgtcggtcaggtcgaggatccttcgggcgccgcgatcgttcaa
gccgcaatcaccctgaccaacaaaggtaccggtcaagtctacgaagccaaggcagatgag
ggtggccgtttcaccgtctccaacgtcctgcccggcgactacgatttgaaggtttccgct
aacggtttccggacccagaaccggactgacatccgcgtctcggccgcgggtatcagccgt
accgacatccgcatggaagttggcgcaattgctgagcagatcaccgtcgaagcgtcggcc
actgcgctgcagaccgacaaggccgatacgcataccgagttgaactcgaagcaggtggcc
aatctcccgctgcctggtttccgcaactatcagagcttgatcaatctggtcccgggcgcg
acgcccgcaggcttccagaattcgatcaccgattcgcccggccgttcgctggcgaccaac
atcaacggtacgaacaagaacaacaacgtcacccgtattgacggcgcggccagcgtgaac
ctctggctgccgcaccatgctggctatgtcatgccggccgaaatggtcgacaccgttaac
gtcaccactgctgctggcgactccgatcagggcatggccggcggcgccgccgtcaccgtg
ctgaccaagtcgggcacgaaccagattcacggcagcttgttcgaataccacgacaaccag
aatctgaaggccttcaactacttcaccaaggcgacggccacgacgcccgctgctgcctcc
gctctcaagaagcccctccgtatttacaacaactacggcggcaccatcggcggcccgatc
aagaagaacaagcttttctacttctacagctttgacggcacccgccagcgtgacggcaac
cagggcacctactccgtgccgactgcagccatgaagaacggcgacttcagcgccatcagc
accgtcatctacgacccgctgaccggatccccggacggcacgggccgcaccgcctttgcc
ggcaacaagattccgacttctcgcatgagccccgccgctctgaagattcagaactactat
ccggctcccaacaccaacctgtcgggctaccagtcgaactacttcgcggcagccgttccc
gccttcaaccgcgactacaacgacatcaagatcaactacaacatgagcgacaagcagcag
atcttcggtcactacggcatcatgaaggccctggtggtcggcaagaacctgtttggcgac
ggcgttggcccggctcccggcgctgaccccggcaccggcgacacccgcgtgcagaacatg
tccatcggcactaaccgtgtcatcaccaccaacctgctgttcgacggcgtgatcggttat
cagcgccaggaccagaccgtgcgtggtgtggactacggcaaggacttctccacgacgctg
ggcatccccggcatcggcggatctgatcctcgccagcagggcttcccgaacatcagcatc
aacggatatgacggctttggtgttcccggctggatgcctctgacccgtgttgaggagaac
tacactctcagcgcgaacctgacctggaccaagggcaagcacaacttccgctttgggttc
aacggcgtgaactaccgcatgacccactggcagccggaactcggtgccggtcctcgcggt
tcgttcgatttcaccggcgggccgacctcgctggctggtggctcgacggataacttcaat
ggctatagctccttcctgctcggccagtcgaatagcgtccagaagagcttccagtacatc
accatgacgccgcgcgaattccagttcagctggtacgcgcaggaccgctggcagatcagc
cgcaagctgaccatgaccctcggtctgcgttatgaactgtacccgctgatgacccgcgcc
accggcaagggcatcgagcggctggatcccgaaaccaacctcgtgtatatgggcggccgc
ggcaacaaccccaccggcgtcggtgtgaccgtcagccacaagctgatctccccgaccctg
ggcatcgcctatcgtctcgacgacaagacggtgatccgcaccggctacggcatcaacttc
gatccgctgccgttctcccgccccttgcgtggtttctatcctctgaccatcaacattgct
gcgaccgcacagggtagcgaagtcgccggcacgctggagaagggcattcccgccactccg
ctgccggacctgacctccggtgtcctgccgctgccgatcaatgctgacatgcgcagcccc
tatctgggccagatccaccgcggctacacgcagtcgtggaacttcacgattgagcgcaag
ctgccgatggatgtcctgtccacgatcgcctatgtcggcacctcttcggtgcacctgctg
gccgaccgtgacatcaatgcgggttcgccgggcgattccgccggtgcctccctgcggcgt
ccctactacgccaagttcggccgcaacctcgcgaccaacatgtgggatggctacctcagc
tccaactaccactcgctgcagaccagcgtccgcaagtctctcagcaagggtctgatgctg
cagggcgcctacacctggtccaaggccatcaacatgaccgacgaagatggctgggcgagc
gtgggcttcaactggggaccggtgttccgtcgcaaccgcgcggccgccggctacgatcgc
acccatgtcctccagatgggctgggtctacgaactgccgatgggcaagggcaagcagttt
gtcacgaatggtatcggctcgaagatcctcggtggctggtcggttaacggcatcatgtcc
aactacacgggcactccgttcaccgtctccggttccagcggcgctctgaatgccgccagc
aataccgcgacggccgatcaggttggctccgttactcgcattggtgcgatcggcgcgggc
tcaacctactacaacacgtcggccttcgccaacgtcacgactaccaccaccggcggcgta
taccgcttcggtacgtcgggccgcaacatcctgcgcgctcctggcatgtggaacaccgat
ctgatggtcaaccggaccttccagatcaccgagcgcatcaccaccgcgttccgcgctgag
ttctacaacctgccgaacacctcccacttcggtggcgtgtccagcggcaacgtgaccagc
ggcaacttcatgcgcatcctgagctcctctggcgaacgccagatccgcttcggcctgcgc
ctcggcttctaa
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