Paludibaculum fermentans: IRI77_21020
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Entry
IRI77_21020 CDS
T06895
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer00020
Citrate cycle (TCA cycle)
pfer00190
Oxidative phosphorylation
pfer00650
Butanoate metabolism
pfer00720
Other carbon fixation pathways
pfer01100
Metabolic pathways
pfer01110
Biosynthesis of secondary metabolites
pfer01120
Microbial metabolism in diverse environments
pfer01200
Carbon metabolism
Module
pfer_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfer_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IRI77_21020
00650 Butanoate metabolism
IRI77_21020
09102 Energy metabolism
00190 Oxidative phosphorylation
IRI77_21020
00720 Other carbon fixation pathways
IRI77_21020
Enzymes [BR:
pfer01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IRI77_21020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
GIDA
NAD_binding_8
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QOY92087
UniProt:
A0A7S7NYJ6
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All DBs
Position
complement(5356905..5358818)
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AA seq
637 aa
AA seq
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MNLDSKIPSGPIEQKWQKAKFEMKLVNPANKRKYNVIVVGSGLAGGAAAASLGELGYNVK
CFCFQDSPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTVKGGDFRAREANVYRLAEVS
VDIIDQCVAQGVPFAREYGGVLANRSFGGAQVSRTFYARGQTGQQLLLGCYQALERQVDA
GRVKMLYRYEMLELVVIDGRARGIITRNMVTGEIESHVADAVVLGTGGYGNVFYLSTNAK
GSNATAIWRAYKKGAGFANPCYTQIHPTCIPQSGDYQSKLTLMSESLRNDGRIWVPTKKA
DTRDPNTIPETERDYYLERRYPAFGNLCPRDIASRAAKVACDEGYGVGPGGRGVYLDFSE
SINRLGQNVIAERYGNLFEIYERITGDDPYKKPMRIYPAVHYTMGGLWVDYQLQSTIPGL
FVLGEANFSDHGANRLGASALMQGLADGYFVIPYTMGNYLAGVKPGGVDATHQEFRAARE
TVDARTKKFLSIKGKKTVDDFHRELGKVMWEDCGMARNAKGLEHAIARIPELRAEFWENV
NVPGSGAELNQSLERAGRVADFLELGELLCRDARIREESCGGHFREEYQTEDGEAKRDDV
NFCHAAVWEYQGENKIPVRNTEPLEFEHVHLAQRNYK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ctgaatctggattcgaagatcccttccggaccgattgagcagaagtggcagaaggccaag
ttcgagatgaagttggtcaatccggccaacaagcggaagtacaacgtgattgtcgtcggc
agcggcctggcaggcggcgcggcggcggccagcctgggcgaactgggctacaacgtgaag
tgcttctgttttcaggattctccccggcgcgcccactcgattgcggcccagggcggcatc
aatgccgcgaagaattatcaaaacgatggcgatagcgtctaccggctgttttacgacacg
gtgaagggcggcgatttccgcgctcgcgaagcgaatgtctaccggctggcggaagtcagc
gtggacatcatcgaccagtgcgtagcgcagggcgtaccgttcgcgcgggagtacggcggc
gtgctggcgaaccgcagtttcggcggggcgcaggtatcgagaacgttttacgcgcgaggg
cagacggggcagcagttgctgctgggctgctaccaggcgctggaacgccaggtggatgcc
ggccgtgtgaagatgctgtaccgctacgagatgctggaactggtcgtgatcgacggccgg
gcgcgcggcatcatcacccggaacatggtgacgggtgagattgagagccatgtggcggac
gccgtggtgctgggcaccggcggctacggcaacgtgttctatctgtcgacgaacgccaaa
ggctcgaacgcgacggcgatctggcgcgcatacaaaaagggcgcgggcttcgcgaatccc
tgctacacgcagatccacccgacatgcattccgcagagcggcgactaccagtcgaagctg
acgctgatgagcgagtcgctgcgcaacgacgggcgcatctgggtgccgacgaagaaggcg
gacacgcgcgatccgaacacgatccccgagacggagcgcgactactacctggagcggcgc
tatccggcgttcggcaacctctgcccccgcgacatcgcgtcgcgtgcggcgaaggtggct
tgcgacgaaggctatggcgtcggccccggaggccgcggcgtttatctggacttcagcgag
tcgatcaaccggctgggccagaacgtgatcgcggaacgctatggcaacctgttcgagatc
tacgagcgcatcacgggcgacgatccgtacaagaagccgatgcgcatctacccggctgtc
cattacacgatgggcggcctgtgggtggactatcagctgcagtcgaccatcccgggcctg
ttcgtgctgggcgaggcgaacttctccgatcacggagcgaaccgcctgggcgccagcgcg
ctgatgcagggtctggccgacggctacttcgtgatcccctacaccatgggcaactacctg
gccggtgtgaagccgggcggcgtggacgcgacgcaccaggagttcagggcagcgcgcgag
acagtggacgcgcggacgaagaagttcctgtcgatcaagggtaagaagacggtggacgac
ttccaccgtgagctgggcaaggtgatgtgggaggactgcggcatggctcgcaatgccaag
ggcctcgagcacgcgattgcccgcatccccgagctgcgggccgagttctgggagaacgtg
aatgtccccggtagcggcgccgagctcaaccagagcctggagcgcgccggccgtgtggcc
gacttcctggaactgggcgaactgctctgccgcgacgcacgcatccgtgaagagagctgc
ggtggccacttccgtgaggagtaccagacggaggacggcgaggcgaagcgcgatgacgtg
aacttctgccacgcggccgtttgggagtatcagggcgagaacaagattccggtgcgcaac
acagagccgctggagtttgaacacgtccacctggctcagcggaactacaaatag
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