Paludibaculum fermentans: IRI77_23005
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Entry
IRI77_23005 CDS
T06895
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfer03032
]
IRI77_23005
03036 Chromosome and associated proteins [BR:
pfer03036
]
IRI77_23005
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_23005
DNA replication proteins [BR:
pfer03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IRI77_23005
Chromosome and associated proteins [BR:
pfer03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IRI77_23005
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IRI77_23005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
FliG_N
HU-HIG
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QOY85681
UniProt:
A0A7S7NL85
LinkDB
All DBs
Position
5855210..5855536
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AA seq
108 aa
AA seq
DB search
MAEVKKLTQTQLVKEIATATGISNKQAKAVLDKYVEIAIAQTKKVGLCVLPGIGRLKKVE
RKARTGRNPATGATIKIPAKKVVKLTLAKSLKDAIVPAPKPKAPKKKA
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtaaagaaattgacgcagactcagttggtgaaggagatcgccaccgcaacc
gggatttccaacaagcaggcgaaggccgttctcgacaagtacgttgagatcgccatcgcc
cagacgaagaaggttggcctgtgtgtgttgcctggcatcggccgcctgaagaaagtggag
cgcaaggctcgtaccggccgcaatcctgccaccggcgccaccatcaagatcccggccaag
aaggtcgtgaagctgaccttggccaagtccctgaaggacgccatcgttccggcgccgaag
ccgaaggcccccaagaagaaggcgtag
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