Paludibaculum fermentans: IRI77_24675
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Entry
IRI77_24675 CDS
T06895
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03030
DNA replication
pfer03430
Mismatch repair
pfer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IRI77_24675 (holA)
03430 Mismatch repair
IRI77_24675 (holA)
03440 Homologous recombination
IRI77_24675 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfer03032
]
IRI77_24675 (holA)
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_24675 (holA)
Enzymes [BR:
pfer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IRI77_24675 (holA)
DNA replication proteins [BR:
pfer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IRI77_24675 (holA)
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IRI77_24675 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QOY85992
UniProt:
A0A7S7NLS8
LinkDB
All DBs
Position
6267293..6268366
Genome browser
AA seq
357 aa
AA seq
DB search
MTPDQFLRTLSKQEPEPVYLFVGPEGYRRAPCRKALLEKVLSEEDREEGYARHDLDELSI
NEVLDDARSMSLFARNRVIWVASAESALPRGRAAASEEEEGSGKSAVGPEALAAYCKDPT
PGVVVVFDARKWDFDGEDKTKMDRLAKYYGAIRAVVEFAKFTPQDARAFVQSHAAERGLR
LGSNEIDLLVEATAADASRLANEVEKLALFAEVNGGKVTAADIANMVPNAQETTVFNLVN
ALARRSRVEAMQLLDTLVREGEYLPLALTFLGGIFRLALAAREQGLRSSSEVQSFFQRQG
TPMWRSRADQIHTASSKFTKEKLEEAIQLVFRADRDMKSSRVDDRIVMEDFVLRLTR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggaccagttcctacgcacattgtcgaagcaggagccggagcccgtctatctg
ttcgtgggtccggaaggctaccggcgggcgccgtgccgcaaggcgctgctcgaaaaggtg
cttagcgaagaggatcgcgaagagggttatgcccgtcacgatctggacgagttgtcgatc
aatgaagtcctggacgatgcccgctcgatgtcgctgtttgcgcgtaaccgggtgatctgg
gtggcgtcggcggaatcggcactgccgcgcgggcgggccgcggccagcgaagaagaggaa
ggctccggcaagtcggccgtcgggcccgaagcgctcgcggcctattgcaaggatccgacg
cccggggtcgtggtggttttcgacgcccgcaagtgggacttcgacggcgaggacaagacg
aagatggaccgtctggcgaagtactacggagcaattcgcgccgtggtggagttcgccaag
ttcacgccgcaggacgcgcgcgccttcgtgcagtcgcatgcggcggaacgcgggctgcga
ttgggttcgaacgagatcgacctgctggtggaagccacggcggctgacgcgtcgcgcctc
gcgaacgaagtggagaagttggccctgttcgccgaggtgaacggcggcaaggtgacggca
gccgatatcgccaacatggtgcccaatgcacaggagaccacggtgttcaacctggtcaat
gcgttagcgcgccgcagccgtgtggaggcgatgcaactgctggacacgctggtgcgcgaa
ggcgagtatctgccgctggccttgacgttcctgggcggcatcttccgcctggcgctggct
gcgcgcgaacaggggctgcgttcctccagcgaagtccagagtttcttccagcggcagggc
actccgatgtggcggtcgcgcgcggatcagatccacacggccagttccaagttcacgaaa
gagaagctggaagaggcgatccaactggtcttccgcgccgatcgcgacatgaagagttcg
cgtgtcgacgaccgcatcgtgatggaagacttcgtgcttcgcctcacgcgttag
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