Paludibaculum fermentans: IRI77_24790
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Entry
IRI77_24790 CDS
T06895
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IRI77_24790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfer02000
]
IRI77_24790
Enzymes [BR:
pfer01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
IRI77_24790
Transporters [BR:
pfer02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IRI77_24790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_29
AAA
AAA_21
AAA_30
SbcC_Walker_B
nSTAND1
MMR_HSR1
AAA_25
Rad17
Motif
Other DBs
NCBI-ProteinID:
QOY86012
UniProt:
A0A7S7NLV9
LinkDB
All DBs
Position
6295369..6297249
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AA seq
626 aa
AA seq
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MLHRPGAHHPNRFAAPSENEPPVQLSTLPWKRLLAYLQPYRGRMAVAILALLGSSALGLA
FPMVIVRLLDSATRTHSLSSLNGLALLLLGIFLTQAALSFLQSIMLAVIGENIVCDLRTT
LYTHLHRQSLDFYSGRRVGEIVSRLSSDVTQMRTVLTSNITSLLSQSVSLIGALVIVLSI
NIQLSLFILALVPPLVLLVAFFGRRIQKSSTGLQDHLADATTVAEEALQGIRVVKSFGQE
QHETTRYGAAARKALSASLRMAFLHSSFSSVMMFLGFGTISAIMWYGGREVIAGRLSLAM
INGFLMYGIMIAGSLGGLAGLYAQFRAAIGGVQRVFEILDLHPTVQDTPGAVTLTGTQGH
LRFDNVTFHYEPNVPVIKGIMLDIQPGEILALVGPSGAGKSTLFNLIPRFYDPAGGSVQL
DGRDLRSVTQHSLREQMALVPQETMLFGGTIRENILYGRLGATEEQMIAAARSANAHDFI
MEFPQQYETVVGERGAKLSGGQRQRIAVARALLKNPRILLLDEATSSLDNDSEGLVQQAL
NHLMQGRTTVIIAHRLSTIKVAHRIAVMDGGRIVELGTHRELMALDGLYAHLYSMQFPDS
SVATPPHHSEVRRMPPASILAPAAAD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcgaccaggcgcacaccatccaaaccgcttcgccgcgccatccgaaaatgaa
ccacctgtccagctctcgactcttccgtggaaacgcctgctcgcttacttgcagccctat
cggggacgcatggccgtagccatcctcgcgctgctgggttcgtccgcgctggggctcgct
ttccccatggtgatcgtccgcctgctcgactccgccacacgcacccacagcctctcttcc
ctcaacggactggccctgctgctgctgggcatcttcctcacccaggccgcgctgtcgttc
ctccagtccatcatgctggccgtcatcggcgagaacatcgtctgcgacctgcgcaccacc
ctatacacccacctgcaccgccagtcactcgacttctactcgggacggcgtgtcggcgaa
atcgtatcccgactctccagtgacgtgacgcagatgcgcaccgttctgacaagcaacatc
acctccctgctcagccagagcgtgtccctcatcggagcgcttgtcatcgttctctccatc
aacattcagctctcactgttcatcctggcgctggttccgccgctggtcctgctcgtggcg
ttctttggacgccggatccagaagtccagcacgggcctccaggatcacctcgccgacgcc
accaccgtcgcggaagaggctctgcagggcatccgcgtcgtgaagagcttcggccaggag
cagcacgagaccacccgttacggggcagccgcccggaaggcgctctcggcctccctgcgc
atggccttccttcactcttccttctcctcggtgatgatgttcctgggcttcggcaccatc
tccgccatcatgtggtacggcgggcgcgaagtgatcgccggacgcctctccctcgctatg
atcaacggcttcctgatgtacggcatcatgatcgccggcagtctcggcggcctcgccggt
ctctacgcccagttccgtgcggccatcggcggtgtccagcgtgtctttgaaatcctcgac
ctccatcccaccgtgcaggacacgccgggcgccgtaaccctcaccggcacgcagggccac
ctccgcttcgacaacgtgacgttccactacgaacccaatgtgccggtcatcaagggcatt
atgctcgatatccaaccgggcgagatcctggctctggtcggccccagcggagcaggcaag
agcacgctgttcaacctcatcccgcgcttctacgatccagccggcggcagcgtccagctc
gatggccgcgacctgcgctccgtcacccagcacagcctgcgcgaacagatggccctggta
ccgcaggagaccatgctctttggcgggaccatccgcgagaacattctgtacggacggctg
ggcgccacggaagagcagatgatcgcggcggcccgctccgccaacgcccacgatttcatc
atggagttcccccagcagtacgaaacggtggtcggcgaacgcggagccaaactcagcggc
ggccagcgccaacgcatcgccgtggcccgtgcccttctcaagaacccccgcatcctgctg
ttggacgaggcaaccagctcgctcgacaacgactcggaaggcctcgtgcagcaggcgctc
aatcacctgatgcaggggcgcaccaccgtgatcatcgcccatcgcctcagcaccatcaag
gtggcccatcgcatcgccgtcatggacggcggccgcatcgtggagctaggcacccaccgc
gaactcatggccctcgatggtctgtacgcccacctctactcgatgcagtttccggacagt
tccgtggccaccccgccccatcactcagaagtccgcaggatgccgccagccagcattctg
gcccccgccgcagccgattaa
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