Paludibaculum fermentans: IRI77_25055
Help
Entry
IRI77_25055 CDS
T06895
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
pfer
Paludibaculum fermentans
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfer02000
]
IRI77_25055
Transporters [BR:
pfer02000
]
Other transporters
Pores ion channels [TC:
1
]
IRI77_25055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
YhdP
AsmA
Motif
Other DBs
NCBI-ProteinID:
QOY86062
UniProt:
A0A7S7SHL7
LinkDB
All DBs
Position
6364841..6368818
Genome browser
AA seq
1325 aa
AA seq
DB search
MSRRLKWILATVVLLLAGLSAGIVLVLRSDWLREKLRASIVEEVERASGGQATLKSFDFD
WGTMTARTGEFTLRGKEAQEQAPLFQADRIQLGLTVLSWIGRDVRLNDLTVEKPRIHIYV
AQDGTTNLPEPKLKKTGGNAVQDLIALKIGKLNVRDGLLEFDSKAIPFSVVAEGLNATLT
YDMVKPRYKAAISARALRLPDGLAPQLEATALLEANQLEIERARLSLGDSWLEASGPLKD
FKNLSGDLKFKGSVLMRDIPGSPVQEGFAVAEGTALFGPDRTPLVQGTIRLEQAGYTAKG
VRLRNVSAASKFELTPSLLILTGLGVRSPYGAWNGAGELRDWKLFHLKGDLTAVALDLVQ
AAVLDQPYAWDGSLRGPVEVSGEITSAGVAHLLAKVALDVAPKEGDLPVSGRIEAAWNQD
SGKLDLGASHLETQSARVNFQGTLGERLEVGLFASRLHDLDPVIGLLLREDGYRLPISLE
DGEARVNAVVSGDLKDPRLQGHVSMTNAVYESVLFQRVAAEFQLSRGRLELTAMELRRNE
AATSGHLALGLKNWVPGSDSVLDGAFDLKNAKLIDLLQVAKITAPIQGGLAGAVTLGGTL
GQPVGSLNFTLTGVDWQEEKFDRIAGNLQLKPGGALQGAADLDQMHLSLAGQYQHPNGNF
RAGELNLTMQSSGLQLRDSERAMTIRPGLDGDVKAELRTRVSIEDGTPLLRALDGALAIR
GLRIGGRQLGELLVNGTTSSGQLTVTASLNLPGSKVEGDATIQLSGDYASKGTFRSPRLP
FRLIKDLTSSSADPSKDEPWPARGFIEGSVAWQAPLTDPRKGSAVITVKTLQVRPRDAQP
LETQVDTNDMTLRNDGPLVIEVDANSARFKSAKVTALDTSLALSGAYLFPAKNPWNLNVK
GSANLAILGSFRPDLISTGVAEIDASVRGTAADPQLSGRMTIQKASFFLKDLPNGIENAS
GTVYFEKNRANIEQLTGQTGGGKFSVNGFLGVSGQELTYRLQANASNIRVRYPEGVSTTL
DAALTLTGSTFRSLLAGSITIQRSGFSSGSDLASMVGGSGNPIPSAASQHEFLRNLQFDV
RIRTTPDAVFQSSYTQDLQTEADLRLRGSPAKPILLGSVKSSQGGIQFFGNRYTVSRGEI
LFYNTAVVQPQIDLDLETRVRGITVYINVNGPLSRLNFTYRSEPPLQSSEIVALLTVGRQ
PESTSSSVTASQSIRNQNVMENTPNSLLGGALSAGVSSRVERFFGSSRIRIDPNFTGVEN
LPQARLSVEQSISRDITLTYITNLSRSQQQIVRVEWDLNKQWSVVAVKDENGTFAMDFLY
RKRFK
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgcctgaagtggatcctggcgacggtggtgctgctcctggccgggctgtcc
gcaggaatcgtgctcgtattgcgcagcgattggctgcgtgagaagctgcgggcttccatc
gtcgaggaggtggagcgcgcgtcaggcggccaggcgaccctgaagtcattcgactttgat
tggggtacgatgaccgcccgtaccggtgagttcaccctgcgcgggaaagaagcgcaggag
caggctcctctcttccaggccgaccggattcagctgggtctcaccgtcctttcgtggatt
ggacgcgacgtccggctaaacgacctgacggtggagaagccgcgcatccacatctatgtg
gcccaggatggcaccacgaacctgcccgagcccaagctgaagaagaccggcggcaatgcc
gtccaggatctcatcgccctcaagatcggcaagctgaacgtacgcgatgggttgttggag
ttcgactccaaggccattcccttctctgtggtggcggaaggattgaatgcgaccctgacc
tacgacatggtgaagccgcgctacaaggccgcaatttcggcccgcgcgctgcgcctgccg
gatggcctggctccgcagttggaagcgaccgctctgctggaggccaaccaactggagatc
gaacgggcacggttgagcctgggcgactcctggctggaagcatccgggccgctcaaggac
ttcaagaacctctcgggtgatctgaagttcaaagggtccgtgctgatgcgggacataccc
ggcagccccgtccaggaaggctttgctgtggccgaaggtacggcgctcttcggccccgat
cgcacccccttggtacaaggcactatccggctggaacaggccggctacacggcgaagggc
gtcaggctgagaaacgtcagcgcggcgtcgaagtttgaactcactccgtcgctgttgatc
ctcaccggactgggtgtcagaagcccttacggtgcctggaatggcgccggagaactgcgc
gactggaagctcttccatctgaagggagacttgacggcggtagcgctggatctggtgcag
gccgcggttctggaccagccctatgcctgggacggcagcttgcgcggaccggtcgaggtg
tcgggagagatcacctccgccggcgtcgcccatttattggcgaaggtggcattggatgtc
gcgccgaaggagggcgacctgccggtttcgggccgcatcgaggccgcgtggaatcaggat
agcggcaagttggacctgggcgcctcacacctcgaaacgcaatcggctcgagtgaacttc
caggggacgttgggcgagcggttggaagtgggtttgttcgcatcccggctgcacgatctg
gatcccgtcatcgggctgctgctcagggaagacggttaccggttgcccatcagtctggaa
gatggcgaagcacgcgtgaatgcggtggtgagcggcgacctgaaggatccgcgccttcag
ggccacgtttcgatgacgaatgctgtctacgagtccgtcctgttccagcgcgtcgccgcc
gagttccagctttcccgcggccgtctggaactgaccgcgatggagctgcggcgcaacgag
gcggccaccagcggccatctggcgctcggcctgaagaattgggtgcccggctcggacagt
gtgctcgatggcgcctttgacctgaaaaacgccaaattgattgacctgttgcaggtcgcc
aaaatcaccgcgcccatccagggcgggctggccggtgcggtcaccctgggcggaaccctg
ggccaacccgtggggtcgttgaacttcacgttgaccggggtcgactggcaggaagagaag
ttcgaccgcatcgccggcaatctccagctgaaaccgggcggcgcgctgcagggcgcggcg
gacctcgaccagatgcacttgtccctggccggccagtatcagcaccccaacggcaatttc
cgggccggtgaactgaacctgacgatgcagtccagtgggctgcaactccgcgactcggaa
cgggcgatgacgatccggcccggtctggacggcgacgtcaaggctgagttgcgcacccgc
gtcagcattgaggacggaacgccgctcctgcgtgccctcgacggcgcgctggccattcgc
gggctccgcatcggaggccgccagctcggcgaactgctagtgaacggcaccacttccagt
ggacaactgactgtcacggccagcctcaatctgcccggcagcaaagtggaaggagatgcg
accatacagctctccggcgactatgcgtcgaagggcacattccgctccccacgcctgccg
ttccgccttatcaaggatctcacctccagttcggccgacccgtcaaaggacgagccctgg
ccggcgcgtggtttcatcgaaggatccgtcgcctggcaggcgccgctgaccgacccgcgc
aagggctcggccgtcattacagtgaagaccctgcaggtgcgcccacgcgacgcccagcca
ttggaaacgcaggtcgacactaacgatatgacactgcggaacgacggcccgctggtgatc
gaggtggatgcgaactcggcccgtttcaagtcggccaaggtgaccgcgctggacaccagc
ctggcgctctccggggcgtatcttttcccggctaagaatccgtggaacctgaacgtcaag
ggctcggcgaacctggcgattctgggcagcttccggcccgatctcatatccaccggcgtg
gcggagattgacgcctccgtgcgtggcacggccgccgatccccagttgagcggccgcatg
accatccaaaaggcctcattcttcctcaaggatctgcccaacgggattgagaatgcgagc
ggcaccgtctacttcgagaagaatcgcgccaacatcgaacagctcaccggccagaccggc
ggcggcaagttctctgtaaacgggtttctcggcgtgtcgggccaggagctcacctaccgc
ctgcaggccaacgcttccaacattcgcgtgcgctaccccgaaggcgtgagcacgactctg
gacgcggcattgacgctgaccggttcgaccttccgcagcctgctggccggctcgatcact
atccagcgctccggcttcagcagcggcagcgatctggcgagcatggtcggcggctccggc
aaccccattccgtcggcggcttcgcaacacgagttcctgcgcaacctgcagttcgatgta
cgcatccgcacgacgcctgacgctgtcttccagagcagctacacccaggatctgcagact
gaggcggatttgcggctgcggggcagcccggcgaagcccatccttctgggcagcgtgaaa
tccagccagggcggcatccagttcttcggcaaccgctacaccgtctcacgcggtgagatc
ctcttttacaacacggccgtcgtccagccgcaaatcgacctggacctggaaacgagggtc
cgcggcatcacggtctacatcaacgtcaacggcccgttgagccgcctgaacttcacatac
cggtccgaaccgccgctgcagtcgtccgaaattgtggcgctgctcaccgtcggccgccag
cccgaatccacttccagttccgtcactgcctcccagagcatccgcaatcagaacgtgatg
gagaacacgccgaactccctgctgggcggagccttgagcgccggagtctccagccgcgtc
gagcgcttcttcggctccagccggatccgcatcgatcccaacttcaccggagtggaaaac
ctcccacaggcgcgcctctccgtcgaacagtccatttcgcgcgacatcacgctcacctac
atcacgaacctcagccggtcgcagcagcagatcgtacgcgtcgagtgggatttgaacaaa
cagtggtccgttgtcgcggtcaaggatgaaaacggcacctttgccatggacttcctctac
cgcaagaggtttaagtaa
DBGET
integrated database retrieval system
