Paludibaculum fermentans: IRI77_26515
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Entry
IRI77_26515 CDS
T06895
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IRI77_26515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_26515
Enzymes [BR:
pfer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IRI77_26515
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IRI77_26515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QOY92144
UniProt:
A0A7S7NZH0
LinkDB
All DBs
Position
complement(6710658..6711320)
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AA seq
220 aa
AA seq
DB search
MPKGLAQLEQEIIQCEHCPRLREYCQEVARVKRRAYLDWDYWGRPVPGFGDPRAQVFILG
LAPAAHGANRTGRVFTGDRSGYWLYRALHQTGFANQPSSDHRGDGLQLTNAWVSASVRCA
PPDNKPTPQEIVACRVYLDQELVLIKQVKVVVALGRLAFDNYLGKRRSKFEFKHDGEFHL
GAGEPILISSYHPSQQNTSTGKLTEPMLRAVFERAQRLVA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggggctggcccagctcgaacaagagatcatccagtgcgagcactgcccgcgc
ttgcgggaatactgccaggaagtcgcgcgcgtcaaacgccgcgcctatcttgattgggac
tactgggggcggccagtacccggcttcggcgatccgcgcgcccaggtattcatcctgggt
ctcgcgcccgctgcccacggcgccaaccggacgggccgcgtcttcaccggcgaccgctcc
ggctactggctctaccgcgccctccaccagaccggtttcgccaaccagccctccagcgac
catcgcggcgacggcctccagttgaccaacgcctgggtcagcgccagtgtccgctgcgcg
ccgccagacaacaaacccactccgcaggagatcgtcgcctgccgtgtgtatctcgaccag
gaactcgtcctgataaagcaggtgaaagtcgtggtggctctcggccgcctggcctttgac
aactaccttggcaagcgccgctcgaaattcgagttcaagcatgacggcgaattccatctc
ggtgcgggtgagcccatcctgatcagttcctatcaccccagccagcagaacacctccacg
gggaaactcacggaacccatgctgcgtgccgtgttcgagcgtgctcagaggctggtggca
tga
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