Paludibaculum fermentans: IRI77_27110
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Entry
IRI77_27110 CDS
T06895
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IRI77_27110 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfer03019
]
IRI77_27110 (groL)
03110 Chaperones and folding catalysts [BR:
pfer03110
]
IRI77_27110 (groL)
03029 Mitochondrial biogenesis [BR:
pfer03029
]
IRI77_27110 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfer04147
]
IRI77_27110 (groL)
Enzymes [BR:
pfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IRI77_27110 (groL)
Messenger RNA biogenesis [BR:
pfer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IRI77_27110 (groL)
Chaperones and folding catalysts [BR:
pfer03110
]
Heat shock proteins
HSP60 / Chaperonin
IRI77_27110 (groL)
Mitochondrial biogenesis [BR:
pfer03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IRI77_27110 (groL)
Exosome [BR:
pfer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IRI77_27110 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IRI77_27110 (groL)
Exosomal proteins of breast cancer cells
IRI77_27110 (groL)
Exosomal proteins of colorectal cancer cells
IRI77_27110 (groL)
Exosomal proteins of bladder cancer cells
IRI77_27110 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Toprim
Motif
Other DBs
NCBI-ProteinID:
QOY86445
UniProt:
A0A7S7NMU2
LinkDB
All DBs
Position
6879335..6880921
Genome browser
AA seq
528 aa
AA seq
DB search
MAKQIIYSDHSRQAILRGVNQLAEAVKVTLGPRGRNVVLEKKFGGPTITKDGVTVAKEIE
LKDPLENMGAQMVREVASKTSDVAGDGTTTATILAQAIFREGVKAVAAGANPMAVKRGID
KSVALVVEELQKLSKPVSGDMIAQVGRISANSDSTIGDVIAEAMAKVGKDGVITVEESKT
MTTELQTVDGMQFDRGYLSPYFVSDPERMECVLEEPYILIHEKKISSMKDILPLLEQIAR
AGKPLLLLSEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDISILTGGKAIM
EETGITLESVRLEDLGRAKRVTVDKDTTTIIDGGGVQQSIEGRIKQLRTQIEDTTSDYDR
EKLQERLAKLAGGVAIIKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRA
SIVLRTLKLEDDEQFGVTIVRRACEEPVRQIVLNCGTEGAVVAAKIMDSDDPHYGFNAST
EVYEDLVKAGVIDPTKVTRSALQNAASIASLMLTTEAMICSVVDEPEV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagatcatttacagcgaccactcccgccaggcaattctgcggggggtgaac
cagctcgccgaggcagtgaaagtcacgctgggaccgcgcggacgcaatgtcgttctcgag
aagaagttcggcggaccgacgatcaccaaggatggcgtgaccgtcgcgaaggagatcgaa
ctgaaagacccgttggagaacatgggcgcccagatggtgcgtgaagtggcgtccaagact
tccgacgtggccggtgacggcacaacgactgctaccattcttgcccaggcgatcttccgc
gaaggcgtcaaggcagtagccgccggagccaacccgatggctgtcaagcgcggcatcgac
aagtcggtcgctcttgttgtggaagagctgcagaagctctccaagcccgtctccggcgac
atgatcgcccaggtgggccggatttccgccaatagcgactccaccatcggcgacgtcatt
gccgaagccatggccaaggtcggcaaggatggcgtgatcaccgtggaagagtcgaagacc
atgaccaccgagttgcagacggtggatggcatgcaattcgaccgcggttacctctccccc
tacttcgtcagcgatccggagcgcatggagtgcgtgctcgaggagccgtacatcctgatc
cacgagaagaagatcagcagcatgaaggacattcttccgctgctggagcagattgcccgc
gcgggcaagccgctgctgcttctatcagaagatgtcgaaggcgaagccctggcgacgctc
gtggtcaacaagttgcgcggcacgctcaatgtctgcgctgtgaaggcgcccgggtttggc
gatcgccgcaaggcgatgctcgaggatatctcgatccttaccggtgggaaagccatcatg
gaagagaccggcatcaccctcgagagcgtccgcctggaggacctgggccgcgccaagcgt
gtcacggtcgacaaggacaccacgacgatcatcgacggcgggggcgtgcagcagagcatc
gagggccgcatcaagcagctccgcacccagattgaagacaccacttcggactacgatcgc
gaaaagctgcaggaacgcctcgccaaactggcgggcggcgtagccatcatcaaggttggc
gctgcgaccgaaaccgagatgaaagagaagaaggcccgtgtcgaggatgcactccatgcc
acgcgggcggccgttgaggaaggcatcgtgcctggcggcggagttgcgctgctgcgcgcg
tccatcgtcctgcggaccctcaagctggaagatgacgagcagttcggtgtcaccatcgtg
cgtcgcgcctgcgaagagcctgtccggcagattgtgttgaactgcgggaccgaaggcgcc
gtcgtggccgcgaagatcatggatagcgacgatccccactacgggttcaacgcctccacg
gaggtctacgaggatctcgtgaaggccggcgtgatcgatccgaccaaagtgacgcggtcc
gctttgcagaacgcggcctccatcgcctctcttatgctgacgacggaagcgatgatctgc
tctgtggtggacgaacccgaagtttag
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