Paludibaculum fermentans: IRI77_27285
Help
Entry
IRI77_27285 CDS
T06895
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IRI77_27285 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_27285 (mutM)
Enzymes [BR:
pfer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IRI77_27285 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IRI77_27285 (mutM)
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IRI77_27285 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QOY86477
UniProt:
A0A7S7NMQ9
LinkDB
All DBs
Position
6921858..6922649
Genome browser
AA seq
263 aa
AA seq
DB search
MPELPEVETIVRTLRPRVAGRRILEARYLSPYAAGHQPEAMAAGLTGRTIVDLRRAAKYL
VFDLDQGFLSVHLRMTGKLLFDAVPGPFARAILTLDPGTLIFDDVRQFGRFLWSPELPAN
VAALGPEPFDLQPAAFAQRLRARRAHVKPLLLNQQFIGGLGNIYVDEALHRAGIHPLAQS
SGLSARRAQLLHATIIEVLAEAIAAGGSSISDYVDAEGRAGSFQRFHRVYGREGEPCLQC
GKPIHRIVVGQRGTHFCPACQKR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaagtcgagaccatcgtccgcacgctgcgcccgcgcgtagccggc
cgccgcatcctcgaggcccgctacctctccccatacgccgccggacatcagcccgaagcc
atggccgccggcctcaccggccgcaccatcgtggacctccgccgcgccgccaagtatctt
gtgttcgacctcgaccagggcttcctctcggtccacctgcgcatgaccggcaagctcctc
ttcgacgccgtccctggaccctttgcccgcgccatcctgacgctcgaccccggcacactc
atcttcgacgacgtccgccagttcggccgcttcctctggtcgcccgagctccccgccaac
gtcgcggctctgggtccggaacccttcgacctccagcccgccgccttcgcccagcgcctc
cgcgcccgccgcgcacacgtcaaaccgctgcttctcaaccagcagttcatcggcggcctg
ggcaacatctatgtggacgaagcgctccaccgcgcgggcattcacccgctggcgcagtcc
tccggcctctctgcccgccgcgcgcaactcctccacgccaccatcattgaagtgctggca
gaggcgatagcggcgggaggatcctctatctctgactatgtggacgcggaaggccgcgcc
ggcagcttccagcgcttccatcgtgtctacggccgcgaaggcgaaccctgtctccaatgc
ggcaaacccatccaccgcatcgtagtcggccagcgcggcacgcacttctgcccggcctgc
cagaagcgctag
DBGET
integrated database retrieval system
