Paludibaculum fermentans: IRI77_29245
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Entry
IRI77_29245 CDS
T06895
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IRI77_29245 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_29245 (xseA)
Enzymes [BR:
pfer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
IRI77_29245 (xseA)
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
IRI77_29245 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Apolipoprotein
Baculo_PEP_C
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
QOY86834
UniProt:
A0A7S7NPE2
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All DBs
Position
7374141..7375517
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AA seq
458 aa
AA seq
DB search
MEQLSFDSAPSVFTVTEVTAAIHRLLTRSFDDVRITGEISGYKVWTSGHAYFTLKDSGAQ
LRCVLFKNTLRYLRFKPNDGLAVVARGSIEVRQERGEYQLIVSSLEPQGLGALQLAFEQL
KARLAAEGLFAAERKRPLPAFPRRIGIVTSPRGAVIRDMLTVLRRRFPGLHIRLFPTPVQ
GEGSIDGICEGLLYFAESGWPDVIIVGRGGGSIEDLWTFNEEAVARCIVECPMPVVSAVG
HETDFTIADFVADLRAPTPSAAAELIVRNRADILTSLETTTHRVERAIHFRLSQAARRLH
EQGIQHAASLLQRRIARLGQRLDDVDQRLRQHDPRTRLAAGRRRLDTAAHALDDRMRRRV
LAVGQRLQNAAQPLPELMRRRLDSASLRLNPLSAQLQALSPLGVLDRGYAIVQTGSGQIV
KSPADAPPGTGLAIRLRSGQLRATVDDRAAGSGELPPV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaacaactcagcttcgactccgcgccctccgtcttcaccgtcactgaggtcactgcc
gccatccatcggctgctcacccgcagcttcgatgacgtccgcatcaccggcgaaatctcg
ggctacaaggtttggacctccggacatgcgtacttcacgctgaaagactccggcgcgcag
cttcgttgcgtcctgttcaagaacaccctccgctacctgcgattcaaacccaacgacggg
ctcgcggtggtcgcgcgcggttctattgaagtgcggcaggagcgtggagaataccagctc
atcgtctcctcgctggagccccaggggctcggagccctgcaactcgccttcgagcagctc
aaagcgcggctggccgcggaaggactcttcgcggcggaaaggaaacgtccgctcccggcc
ttcccgcgccgcatcggcattgtgacctcgccgcgcggagccgtcatccgcgacatgctg
acggtcctgcgccgccgctttcccggtctccacatccggctcttccccacaccggttcag
ggcgaaggctccatcgatggcatctgcgaagggttgctctacttcgcggaatccggctgg
ccggacgtcatcatcgtcggtcgcggtgggggttcgattgaggatctctggacgttcaat
gaagaggccgtcgcgcgctgcatcgtggagtgcccgatgcccgtagtttccgccgttggc
cacgaaaccgacttcaccatcgccgacttcgtcgccgacctgcgggcgcccactccatcg
gccgccgcggagctgatcgttcgcaatcgcgccgatatcctgacgtcgctcgaaacaacc
acccatcgcgtggaacgggccatccacttccggctgtcccaagcggcccgccggctccat
gagcagggtattcaacacgccgccagcctgctgcaacgccgcatcgcccggcttggccag
cgcctcgacgacgtggatcaacggctccgccagcacgatcctcgtacccgcctggcggcc
ggccggcggcgtctggacactgccgcacacgcgctggatgaccgcatgcgccggcgcgtg
ctcgccgtgggccagcgtctccagaacgcggcacagccgctgccggagctcatgcgccgc
cgcctcgattcggcatcgctgcgcttgaatcccctctccgcgcaactccaggccctgagt
ccgctcggggtcctggaccggggctacgcgatcgtccaaaccggttccggccagatcgtg
aagtcgcccgccgatgcaccgccgggcacgggtctcgccatccggctgcgctccgggcag
ctgcgcgccacggtcgatgaccgggctgccggttccggggaacttccgcccgtttaa
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