Paludibaculum fermentans: IRI77_37595
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Entry
IRI77_37595 CDS
T06895
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03420
Nucleotide excision repair
pfer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IRI77_37595
03430 Mismatch repair
IRI77_37595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_37595
Enzymes [BR:
pfer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IRI77_37595
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IRI77_37595
MMR (mismatch excision repair)
Other MMR factors
IRI77_37595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QOY88381
UniProt:
A0A7S7NRB0
LinkDB
All DBs
Position
9463683..9465722
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AA seq
679 aa
AA seq
DB search
MSPTQIGESDIDRLLARLNSGEPDPTRHLSLDESRRRAILNSTDVQACPGSGKTTLVGLK
LMLLLENWHDAYSGICVLTHSNVGIAEILSRVGSDVAGSKLLSYPHFIGTIQDFTNTFLA
LPYARSREWDVHLVDESEFAKIIESAFGWNFKVHDRKENEKYQFSYYFKNGKIDASLFSF
EHKDGQLKIKADFMDRVHRFVDLKRSGYDEDYFFDKRVRFCSDGLFLYSEMYELAKQAIA
SNRELVAALRSRFKIVILDEMQDTQRHQDELLNVIFPPTRCSIQRFGDPDQSIFDAMGGQ
LPNITYNEAALHCITESHRFVPSIASTLASLSYRRVGSFTGLRSPLADSPRNTIFLFEST
SIEKVLPAFATLALALPKQHRSVVKAIGGIGKTASATGLTLPSYWAPFDSKIQSASFRAK
SLCDAVRFCARAGGGDVASRYDVLLVAVLDWMRRAGRKYTTRFGKCISFNRTMLNAYLKE
REKTLAFGEVMNLFIRGYVPSEDEWQEAVNVLTSILELPELNERASEFVAYNRVHYEESD
EQISLKNPNVYDSVDGVRIVLSTIHGVKGETHDATLVCETKYDHWYDIREMVQFLCNADS
VRPIADYTQPKSKETNRATFMKRLFVAMSRPRYLLCLAMTKSHLTGAQRTHLQAVAGWAI
KDLTVKSGSAEARCLFEQS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaacccaaataggtgagtccgatatcgaccgcctcttggcgcgtctgaatagt
ggcgagcccgatccgactcggcatctgtctctcgatgagtcgaggcggagggcaattctg
aattccaccgacgtgcaagcctgtcctggaagcggtaagacgacgctggtcggcctcaag
ctgatgctcctcctggagaattggcacgacgcctacagtggaatctgcgttctgacgcat
tccaatgttggaatcgccgagatcttgtcacgcgtcgggagcgatgttgcaggcagcaag
ctgctcagctatccgcacttcatcgggaccattcaagacttcacgaacaccttccttgcc
ctgccatatgcgagaagccgggaatgggatgttcaccttgtcgacgaaagcgagttcgcc
aaaatcatagagtccgcctttgggtggaacttcaaagtccatgatcggaaggaaaatgag
aagtatcagttctcctactatttcaagaatggaaaaatcgacgcatcactcttctctttc
gagcacaaagacggccagctcaaaataaaagcggacttcatggatcgtgttcatcggttc
gtcgacctcaaaaggagtgggtatgacgaggactatttcttcgacaaacgcgtccggttt
tgcagtgacggtctgtttttgtattcagaaatgtacgaattggcgaaacaggcaatcgct
tcgaatagggaactggtagcggctctgcgttcgcgcttcaagattgtgatactcgatgag
atgcaagatacccaaaggcatcaggatgagttacttaatgtaatcttccccccgaccaga
tgctcaatccagcgatttggtgatccggatcagtcgattttcgatgcgatgggcggccaa
ttgccaaacatcacgtacaatgaggcagcattgcactgtatcacggagagccaccgcttt
gtcccgtccatcgcatcgacgcttgcatcgcttagttatcgtcgggttggttcattcaca
ggattgcggtctccgctcgcagatagtccgcgcaacacgatctttctttttgagagtacc
tctatcgagaaggtgttaccggccttcgccacattggcgctagcgttacctaagcaacat
cgatctgtagtaaaagccattggcgggataggaaaaacggccagcgcgacaggtctcact
ctgcccagttactgggccccgttcgattccaaaatccagtccgcaagctttcgagcgaag
tcgctgtgcgatgccgtgcggttttgtgctcgggctggcggtggtgacgtcgcgagccgc
tacgacgtgctactagtcgcggttctggattggatgaggcgagccggtcggaagtacaca
acgcgcttcggcaaatgtatatcattcaatcgcacaatgctaaacgcctacctgaaagag
cgagagaagacgcttgctttcggcgaggtgatgaatttattcatccgtggatatgttccg
tctgaggacgagtggcaggaagctgtcaatgtgctcacttctattttggagcttcctgag
ttgaatgagagagcctctgagtttgtggcatataacagagttcattatgaagaatcggat
gaacagatatcactaaagaatccaaatgtctacgactctgtggatggcgtgcggatcgtg
ctctcgacgattcatggcgtgaaaggtgagacacacgacgccacgctagtctgcgagaca
aaatacgatcattggtatgacatacgagagatggttcagtttctctgtaatgcggattct
gttcgacctatagccgattacacgcagccgaagagtaaggagacaaatcgggcgacattt
atgaagcgtctgtttgtcgcgatgagccgtcctcgttacttgctttgtttggcaatgaca
aaaagtcatctgaccggggctcagcgaacgcatttacaagccgtggcgggatgggccatc
aaagacctaacagtaaagagcggaagcgcggaggcgagatgcctatttgagcagagttag
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