Pseudomonas simiae PICF7: PFLUOLIPICF701170
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Entry
PFLUOLIPICF701170 CDS
T03767
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLUOLIPICF701170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF701170
Enzymes [BR:
pff01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PFLUOLIPICF701170
DNA repair and recombination proteins [BR:
pff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFLUOLIPICF701170
Prokaryotic type
PFLUOLIPICF701170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AJZ92276
LinkDB
All DBs
Position
complement(253257..253949)
Genome browser
AA seq
230 aa
AA seq
DB search
MTEDDRIKLEPSWKHALRDQFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPIEWRLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagacgaccgtatcaaactcgaacccagctggaaacacgccctgcgggatcag
ttcgagcagccgtacatggcccagctgcgcgagttcctgcgccaggaacatgccgccggc
aaagagatctacccgcccggcccgctgattttcaacgcgctcaattccacgccgttggat
aaggtcaaagtcgtgatcctcggccaggacccgtaccacggccccggccaggcccacggc
ctgtgcttctcggtgcaaccgggtgtgccggcgccgccgtcactggtcaatatctataaa
gagcttaagcgcgacctgaacatcgacatccccaatcacggctacctgcaaagctgggcc
gaccagggcgtgctgatgctcaacaccaccatgaccgtcgagcgcgccaacgccaacgcc
catgcgggcaagggctggcagttctttaccgatcggattatcgaggtggtcagcgaacat
cagccgcacctggtgtttttgctctggggcgctcatgcccaaggcaagcagaagctgatc
gatgccaccaagcacctggtgctgacctcggtgcacccgtcgccactgtcggcgtatcgc
gggtttttgggttgcgggcatttcagtcgcaccaacaagtttcttgagcagaatggcgag
acgccgatcgagtggcggttgccgcctgtctga
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