Pseudomonas simiae PICF7: PFLUOLIPICF701545
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Entry
PFLUOLIPICF701545 CDS
T03767
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pff
Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF701545
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PFLUOLIPICF701545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AJZ92345
LinkDB
All DBs
Position
326603..329449
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQEVDDVDGLLVYHGLNGQNEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEDKVSPEYALVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESENYRPVAEAVQELLDK
GRLSPAAHKTIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPNPDEYLELPLGEHAELYPEVSFQSQPDIEEENRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGEWQALIDEARAERERLE
EELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSSRVSF
VTLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKITPQHAERVAEAKRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRTQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacggccgcttattgaccgtgctctatccggccactggc
gacactcgccagtatgcgctacggaatgcgcccctcactcgcgtgaggttttcgccgggt
gacagcatcacccacttcgaaggctggaaaatgaccgttcaggaagtcgacgatgtcgac
ggcttgctggtgtaccacggcctcaatgggcagaacgagcaggtcaccctgccggaaacc
caactctcgaacttcatccagttccgcctggcgagcgaccgcctgttcgccgggcagatc
gacccgctggcctggttctcgctgcgctaccacaccctggaacacaccagccgccaattg
cagtcctcgttgtggggcttgggtggcgtgcgtgcacaaccgatcgcgcaccagttgcac
atcgcccgtgaggtcgctgaccgtatcgcaccacgggtattgctggctgacgaagtgggc
ttgggcaagaccatcgaagccggcctggtaatccatcgccaactgctgtcgggccgcgcc
aaccgcgtgctgatcctggtcccggaaaacctgcagcaccaatggctggtggaaatgcgc
cgccgcttcaacctgcaggttgcgctgttcgacgaagaacgctttatcgaaagcgatgcc
accaacccgttcgaagacacccaactggctctggttgcgctggaatggctggtggacgac
gaaaaggcccaggacgcgctgttcgccgccggttgggacctgttggtggtcgatgaagct
caccacctggtgtggcatgaagacaaggtcagcccggaatacgcgctggtcgagcaactg
gccgaagtgatccctggcgtattgctgctcaccgccaccccggagcaattgggccaggac
agccacttcgcgcgtctgcgcctgctcgacccgaatcgcttccacgacctgcaagccttc
cgcgccgagagcgagaactatcgcccggtcgccgaagccgtgcaggagctgctggacaaa
ggtcgtctctcccctgccgcgcacaagaccatccagggtttcctcggcaacgaaggtgaa
gcgctgctgaccgccgtcaacgatggcgacaccgaagccagcgcacgcctggtacgcgag
ctgctcgaccgccacggcacgggccgcgtgctgtttcgcaacacccgtgccgctgtgcaa
ggtttcccagagcgcaaactgcacgcctacccgctgccgaacccggacgaatacctcgag
ttgccgctgggcgaacacgccgaactgtacccggaagtcagcttccagtcgcagccggac
atcgaagaagaaaaccgctggtggcgcttcgacccgcgcgtcgaatggctgatcgaccag
ctaaaaatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcattccggccacggtgttccacgagggc
atgaacatcctcgagcgtgaccgcgccgccgcttacttcgccgatgaagagtttggcgcc
caagtgctgatctgttcggaaatcggcagtgaaggccgtaacttccagttctcccaccac
ctggtgctgttcgacctgccgtcccaccccgatttgctggaacagcgcatcggccgactg
gaccggatcggccagaaacacgtgatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtaccacgaagcgctcaacgccttcctcaacacctgtccg
accggcaacgccttgcagcatcagttcggcccacgcctgctgccgctgctggaaaacgcc
gatgacggcgagtggcaagccttgatcgacgaggcccgcgccgagcgtgagcgcctggaa
gaagaactgcacaccggtcgcgaccgcctgctggaactcaactccggcggcgcgggtgaa
ggcgatgcactggtggaagacatccttgagcaagacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattcggaaaacgcgctg
atcctcaagcccagcgaaaagatgctcgacgccagtttccccctgggtgacgacgaaggt
gtgaccatcacctacgaccgtaaccaggcgctgtcccgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgttgtccggttccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctgaagccaggcaccgtgttgctggaactg
ctctacgtcagcgaagtggttgccccgcgctcgctgcaactgggccgttacctgccgccg
gcagccctgcgctgcctgctggatgccaatggcaacgacctgtcgagccgtgtgtctttc
gtgaccctcaacgaccaattggaaagcgtgccacgggccagcgccaacaagttcatccag
gcccagcgcgaccagctgacgccacggatcaacgcgggcgaagagaagatcaccccgcaa
catgccgagcgcgtggccgaggccaagcgtcgcctggcggcggacaccgacgaagaactg
gcacgcctgaccgccttgcaagcggtcaacccgactgtgcgcgacagcgagctggtggcc
ctgcgcacccaacgcgagcaaggcctggccatgctggataaggcggcgctgcgactggaa
gcgattcgggttctggtagcaggttaa
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