Pseudomonas simiae PICF7: PFLUOLIPICF704575
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Entry
PFLUOLIPICF704575 CDS
T03767
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pff
Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF704575
Enzymes [BR:
pff01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PFLUOLIPICF704575
DNA repair and recombination proteins [BR:
pff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PFLUOLIPICF704575
Prokaryotic type
PFLUOLIPICF704575
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Fer2_4
Motif
Other DBs
NCBI-ProteinID:
AJZ92883
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Position
981436..982881
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AA seq
481 aa
AA seq
DB search
MHLIWLRTDLRLHDNTALAAASLRGPIAAVYLITPQQWQSHDDAPCKVDFWLRNLQDLSK
TLGALNIPLLIRTAATWDQAPDVLSKLCHELSVESVHVNEEYGINESRRDAAVSKALEAD
GVTFHRYLDQLFFQPGSVLTKTGTYFQVFSQFRKVCYTRLHSALPRMVAAPKAQAPLKLK
SDPVPNTVEGFAPPSDSLRALWPAGEDEARRRLDAFADQQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQTNGGEFESGDLGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRNAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDAEGVFIK
HWLPELAALNKKDVHNPEAAGGLFGVADYPRSIVDLKKSRERALAAFRSLPSRQAAGGDY
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgatctggctgcgcaccgacctgcgcctgcacgacaacactgctctggccgcc
gcgagcctgcggggcccgattgcggccgtgtacctgatcacgccgcagcaatggcagtcc
cacgatgatgcgccgtgcaaagtggacttctggttgcgcaacctgcaagacctgagcaaa
acgctgggcgcgctgaatattcccctgctgatccgcaccgcagccacttgggaccaagcg
cccgacgtactgagcaagctgtgccacgagctgtcggtggaatcggtgcacgtcaacgaa
gaatatggcattaacgaaagtcgtcgtgatgctgccgtgtccaaggctttggaagccgat
ggcgtgacgttccaccgctacctcgatcaactgttcttccaacccggcagtgtactgacc
aagaccggcacttatttccaggtgttcagccagttccgtaaagtctgctacacccgcctg
cacagcgccctgccccgcatggttgcagcgccaaaggcccaggcgccgctcaagctgaaa
agcgatcccgtcccgaacacggtcgaaggtttcgccccacccagcgacagcctgcgcgcc
ctctggccagccggtgaagacgaagcccggcggcgcctcgatgccttcgccgatcagcaa
atcagctactacaaagacgaacgcgacttccccgcgaaacccggtaccagccagttgtct
gcctaccttgcagcgggcgtcgtttcgccgcggcagtgcctgcatgccgcgctgcaaacc
aacggcggcgagttcgaaagtggcgacctgggcgccatcacctggatcaatgaattgctg
tggcgcgagttctacaaacacatcctggtcggttacccacgggtgtcgcgccaccgcgcg
ttccgcccagaaaccgaggccgtggcctggcgcaacgcgcccaaggacctcgccgcctgg
caggaagcgcgcaccggcttgccgatcattgatgcggccatgcgccaactgctggaaacc
ggctggatgcataaccgcctgcgcatggtggtggcgatgttcctgaccaaaaacctgctg
attgactggcgcgaaggcgagcgttttttcatgcgccacctgatcgacggcgacctggcg
gcgaacaacggcggctggcagtggagttcatccaccggcaccgactcggcgccatacttt
cggattttcagcccgttgagccaatcggagaaattcgacgctgaaggcgtgttcatcaag
cactggctgccggaactggccgcgctgaataaaaaggacgtgcacaaccccgaagccgcc
ggcggcctgttcggcgtggctgactacccgcgctcgatcgtcgacctgaaaaaatcccgt
gaacgtgcgctggccgctttccgcagcctgccctcgcgccaagccgcagggggcgactat
gagtga
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integrated database retrieval system
