Pseudomonas simiae PICF7: PFLUOLIPICF705790
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Entry
PFLUOLIPICF705790 CDS
T03767
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFLUOLIPICF705790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pff03019
]
PFLUOLIPICF705790
03009 Ribosome biogenesis [BR:
pff03009
]
PFLUOLIPICF705790
Messenger RNA biogenesis [BR:
pff03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFLUOLIPICF705790
Ribosome biogenesis [BR:
pff03009
]
Eukaryotic type
Pre-60S particles
RNases
PFLUOLIPICF705790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJZ93092
LinkDB
All DBs
Position
complement(1253380..1253922)
Genome browser
AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDAVLATMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPEVKDSFHKGSTHLALDDIRESIAELQHYRKHFIKA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatttggatcgatctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgaaatggcgacgattgtcaccgacagcaacctcaacaccttggcc
gaagggccggtgattgccatccaccacagcgacgccgtcctcgccaccatggacgagtgg
aatacccgcactcatggcaactccggcctgacccagcgcgtgcgcgacagccgtatcagc
atggccgaagcagaagccgagaccatcgccttcctggaaaagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgcttcctttatacgcatatgaag
gcgctggaaagctacttccactaccgcaacctggatgtgtccacgcttaaggaattggcc
gcgcgctgggcgccggaagtcaaagacagcttccataaaggcagcacgcacttggcgctg
gatgatattcgcgagtcgattgccgagctgcagcattaccgcaagcatttcatcaaggcc
tga
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