KEGG   Pseudomonas simiae PICF7: PFLUOLIPICF707555
Entry
PFLUOLIPICF707555 CDS       T03767                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff  Pseudomonas simiae PICF7
Pathway
pff02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pff00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PFLUOLIPICF707555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pff03021]
    PFLUOLIPICF707555
Transcription machinery [BR:pff03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PFLUOLIPICF707555
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like HTH_23 HTH_31 Sigma70_ECF HTH_24 HTH_3 HTH_11 HTH_Tnp_4 HTH_40 MarR_2 HTH_7 Rv2175c_wHTH HTH_38 HTH_36 HTH_IclR PCI Fe_dep_repress
Other DBs
NCBI-ProteinID: AJZ93397
LinkDB
Position
complement(1663868..1664377)
AA seq 169 aa
MDTATDGQQQLHLLYRDHHGWLQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESR
SYLAQIARNLVIDQWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMP
DNVRQAFLLSQFEGLSYAQIAERLGVTVSSVQKYMTRAIVACYQVAYEE
NT seq 510 nt   +upstreamnt  +downstreamnt
atggacaccgcgactgacggccagcaacagcttcatctcctgtaccgcgaccatcacggc
tggctgcaaggctggctgcgcaggcgcctgggcgaccgcgagcacgcggctgacgtggcg
caggacaccttcctgcgcctactggtgtccggacgattcccgggtgacaaggaaagccgc
agctacctggcgcagatcgcacgcaacctggtgatcgaccagtggcggcgtctacgcatc
gagcgtgcctatctggaaagcatcgcgcacctgcccgagccggaatcgccgtccctggaa
acccgcgcgctgatcctcgaaaccctgatgcagatcgacgccatgctcgaccgcatgccc
gacaacgtgcgccaggcgtttttgctgtcgcagttcgaaggcctgagttacgcacagatc
gccgaacgcttgggggtgactgtcagctcggtacagaagtacatgacccgcgcgattgtt
gcctgctatcaggtggcctacgaagaatga

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