Pseudomonas simiae PICF7: PFLUOLIPICF707555
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Entry
PFLUOLIPICF707555 CDS
T03767
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLUOLIPICF707555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF707555
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF707555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
HTH_31
Sigma70_ECF
HTH_24
HTH_3
HTH_11
HTH_Tnp_4
HTH_40
MarR_2
HTH_7
Rv2175c_wHTH
HTH_38
HTH_36
HTH_IclR
PCI
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AJZ93397
LinkDB
All DBs
Position
complement(1663868..1664377)
Genome browser
AA seq
169 aa
AA seq
DB search
MDTATDGQQQLHLLYRDHHGWLQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESR
SYLAQIARNLVIDQWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMP
DNVRQAFLLSQFEGLSYAQIAERLGVTVSSVQKYMTRAIVACYQVAYEE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcgactgacggccagcaacagcttcatctcctgtaccgcgaccatcacggc
tggctgcaaggctggctgcgcaggcgcctgggcgaccgcgagcacgcggctgacgtggcg
caggacaccttcctgcgcctactggtgtccggacgattcccgggtgacaaggaaagccgc
agctacctggcgcagatcgcacgcaacctggtgatcgaccagtggcggcgtctacgcatc
gagcgtgcctatctggaaagcatcgcgcacctgcccgagccggaatcgccgtccctggaa
acccgcgcgctgatcctcgaaaccctgatgcagatcgacgccatgctcgaccgcatgccc
gacaacgtgcgccaggcgtttttgctgtcgcagttcgaaggcctgagttacgcacagatc
gccgaacgcttgggggtgactgtcagctcggtacagaagtacatgacccgcgcgattgtt
gcctgctatcaggtggcctacgaagaatga
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