Pseudomonas simiae PICF7: PFLUOLIPICF707845
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Entry
PFLUOLIPICF707845 CDS
T03767
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03030
DNA replication
pff03410
Base excision repair
pff03420
Nucleotide excision repair
pff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLUOLIPICF707845
03410 Base excision repair
PFLUOLIPICF707845
03420 Nucleotide excision repair
PFLUOLIPICF707845
03440 Homologous recombination
PFLUOLIPICF707845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pff03032
]
PFLUOLIPICF707845
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF707845
Enzymes [BR:
pff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLUOLIPICF707845
DNA replication proteins [BR:
pff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PFLUOLIPICF707845
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PFLUOLIPICF707845
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFLUOLIPICF707845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AJZ93448
LinkDB
All DBs
Position
complement(1726928..1729705)
Genome browser
AA seq
925 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPNSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPSLPIRGAKTLPAKLEEHREM
AFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELKA
APAVEAVVETVAPTEASYTTILDQATFDIWLKKLNEATLFAFDTETTGIDAQQAQLVGVS
FAVQPHEAAYIPLTHSYIGAPQQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMNILANCA
IGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQDIAGKGAKQL
TFDQIALEQAGPYAAEDADITLRLHQELFAQLSAIPSLASVLTDIEIPLVPVLARIERQG
ALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLKKTGK
GQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAV
AATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLSKDEGL
MNAFRDNLDVHTATAAEVFKVELGDVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKT
AKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAAAERTA
INAPMQGTAADIIKKAMVRVDNWLTESGLDAKVILQVHDELVVEVREDLVAQVSEKIREH
MSAAAQLDVPLLVEVGVGNNWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacccctcgtcctggtggacggttcttcctatctgtaccgcgcgttccac
gcgttgccaccgctgaccacctccaaaggcctgcccaccggcgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcagtacccgaacagtccgttcgcggtggtgttcgac
gccaagggtgggacctttcgcgatgaaatgtacgccgaatacaaggccaaccgcccaagc
atgcccgatgacatgcgcctgcagatcgagccactgcaccagagcgtgatcgccctgggc
ttcccgttgctgtgcgtcgagggggtcgaagccgatgacgtgatcggcaccctggcccgc
agcagtgcggccgctgaccgcccggtggtgatttccaccggggacaaggacatggcacag
ctggtcgacgggcacattaccttggtcaacaccatgaccggtagcgcgatggacatcgag
ggcgtgaaggagaaattcggtgtcgctcccgagcagatcatcgactatctggcgttgatg
ggcgattcatccgacaacattccaggcgttccgggcattggtccgaaaaccgcttccggc
ttacttgtcggcgtgaatggcggcatcaaagagctttatgagcagttggacatcgtaccg
tccctgcctattcgtggcgccaaaacgctgcccgccaagctggaagagcatcgggagatg
gcgtttctttcctaccagttggcgacgatcaagtgtgatgtgccattggatgtcggcctg
gatgacctgcacctgatcgagccggatcgcgagaagctgctggagctgtacacgctgctg
gagttcaagagctggtttgatgaaatccagcgcgacgccaagcgcgtagaactcaaggcg
gcccctgcagttgaagccgttgttgaaacagtggcgccaacagaggcgagctacaccacc
atcctcgaccaggcgaccttcgatatctggctgaaaaagctcaacgaagcgacgttgttt
gctttcgataccgaaaccaccggtatcgacgcccaacaggcgcagttggtgggtgtttcc
ttcgccgtccagccccatgaggcggcctacattccgctgacccattcctacataggcgcg
ccgcagcagttggatcgcgacaccgtgctcctggccctcaagccactgttggaagacccg
accaagctcaaggtcggccagcatgccaagttcgacatgaatatcctggccaactgcgcc
atcggcggcgacccggcacacggcattaccgtgcgcggcatcgcctttgacaccatgctc
gaatcctatgtgttgaactccaccgcaacacggcatgacatggacagtctggccaagaag
tacctggactacgacaccgtcgctttccaggacatcgccggcaagggcgccaagcagctg
acgttcgaccagatcgcgttggagcaggctggcccgtatgcggcggaagacgccgatatc
accttgcgcctgcaccaggagctgtttgcacaacttagcgcgatcccgagcctggcgagt
gtgctcacggatatcgaaatcccgttggtgccggtgctggcccgtatcgagcgtcagggc
gcactggtcgacaaggatctgctgggcatccagagcatcgagctgggcaacaagatggtc
gaactggagcgacaggcgttcgagatcgctggcgaggagttcaacctgggttcgcccaag
caacttggcgcgatcctttacgaaaagctcggcctgccggtactgaaaaaaaccggcaag
ggccaagcctctacggctgaagaggtgctggccaagctggccgaggatgattacccgctg
ccaaaggtgctgatgcagtaccgcagcatgagcaagctcaaaagcacctacaccgaccgg
ctgccggagcagatcaacccgcgcaccgggcgcatccacacctcttatcaccaggcggtg
gcggcgaccgggcggttgtcctccagtgatccgaacctgcagaacattccggtgcgtacc
gccgaagggcggcggatccgtcaggcgttcgtcgcgcccaagggctacaagctactggcg
gcggactactcgcagatcgagctgcggatcatggcgcacctgtccaaggacgaaggcttg
atgaatgccttccgcgacaacctggacgtgcacaccgctacggcggccgaggtgttcaag
gttgaattgggcgacgtcacttcggatcagcgtcgcagtgccaaggcgatcaactttggc
ctgatctacggcatgggggcgcagaagctgggcaaggacattggcgtcgataccaagacg
gccaaggcgtatatcgatgtgtatttcgcccgttatcctggcgttcgcgaatacatggag
cgcacgcgtgcccaggcggctgatcaaggttatgtcgaaacgttcttcggtcgtcgcctg
tacttgccggatatcaactccaacaagccccaggagcgcgcagcggcagagcgtaccgcg
atcaacgcgccgatgcagggtacggcggcggatatcatcaagaaggccatggtgcgggtg
gacaattggctgaccgaatccgggctggatgccaaagtgatcctgcaggtgcacgatgaa
ctggtggttgaggtgcgtgaggacctggtggcgcaagtcagcgagaaaatccgcgagcac
atgagtgctgctgcgcagttggacgtgccgctgctggtggaagtgggcgtgggcaacaac
tgggacgaagcgcactga
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