Pseudomonas simiae PICF7: PFLUOLIPICF708225
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Entry
PFLUOLIPICF708225 CDS
T03767
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pff
Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pff03032
]
PFLUOLIPICF708225 (gyrB)
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF708225 (gyrB)
Enzymes [BR:
pff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PFLUOLIPICF708225 (gyrB)
DNA replication proteins [BR:
pff03032
]
Prokaryotic type
DNA Topoisomerases
PFLUOLIPICF708225 (gyrB)
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PFLUOLIPICF708225 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJZ93521
LinkDB
All DBs
Position
complement(1801199..1803616)
Genome browser
AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVGDSETTGTQIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNDEAPGISGESLERLVNDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVSLEQLGDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDDGAYIQRGERKKQVKEF
KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacacgtacgactcgaccagcattaaagtgctgaaaggtttggatgcc
gtacgcaaacgtcccggtatgtacattggcgacactgatgacggtagcggtctgcaccac
atggtgttcgaggtggtcgacaactccatcgacgaagctctggccggtcactgcgacgac
atcagcatcatcatccacccggatgagtctattaccgtgcgcgacaatggtcgcggcatt
ccggtagacgtacacaaagaagaaggcgtttcggcagcagaggtcatcatgaccgtgctc
cacgccggcggtaagttcgacgacaactcctataaagtttccggcggtctgcacggtgtg
ggcgtttcggtagtgaacgctctttctgaagagttgatcctgactgttcgccgcagtggc
aagatctgggaacagacctacgttcacggtgttccaaaagaaccgatgaaaatcgtcggt
gacagtgaaaccaccggtacgcagatccacttcaagccatcggctgagaccttcaagaat
atccactttagctgggacatcctggccaagcgtattcgtgaactgtccttcctgaactcc
ggtgtgggtatcgtcctcaaggatgagcgcagcggtaaggaagagctgttcaagtatgaa
ggtggcctgcgcgcattcgttgaatacctgaacaccaacaagaccgcggtaaaccaggtg
ttccacttcaacattcagcgtgaagacggcatcggcgtggaaatcgctctgcagtggaac
gacagcttcaacgagaacctgttgtgcttcaccaacaacattcctcagcgcgacggtggt
actcacctggtgggtttccgttccgcactgacgcgtaacctgaacacctacattgaagcc
gaaggcctggccaaaaagcacaaagtcgccaccaccggtgacgatgcccgtgaaggcctg
accgcgattatctcggtaaaagtacctgatccgaagttcagctctcagaccaaagacaag
ctggtgtcttccgaagtgaagactgcggtggaacaggagatgggcaagtacttctccgac
ttcctgctggagaacccgaacgaagccaagctggttgtcggcaagatgatcgacgccgcg
cgtgctcgtgaagcggcgcgtaaagcccgtgagatgactcgtcgcaaaggcgcgctggat
atcgcaggcttgccaggcaaactggctgactgccaagagaaggaccctgccctctccgaa
ctgtacctggtggaaggtgactctgctggcggttccgccaagcagggtcgtaaccgtcgc
acccaagccatcctgccgttgaaaggcaagatcctcaacgtcgagaaggctcgcttcgac
aagatgatttcctcccaggaagtcggcaccttgatcacggcgttgggctgcggtatcggc
cgcgacgagtacaacatcgacaagttgcgctatcacaacatcatcatcatgaccgatgct
gacgtcgacggttcgcacattcgtacgctgctgctgacgttcttcttccgtcagttgccg
gagttgatcgagcgtggctacatctacatcgctcagccgccgttatacaaagtgaaaaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagagtacatgacgcagtcg
gctctggaagatgccagcctgcacttgaacgacgaagcgccgggcatttccggtgagtcg
ctggaacgtctggtaaacgacttccgcatggtgatgaagaccctcaagcgcctgtcgcgt
ctgtaccctcaggaattgaccgagcacttcatctacctgccggctgtcagccttgagcaa
ttgggcgatcacgcagcgatgcaagattggctggctcagtacgaggtgcgcctgcgtacc
gtcgagaagtctggtctggtgtacaaggccagcctgcgagaagaccgtgaacgtaacgtg
tggctgcctgaggtcgaactgatctcccacggtctgtcgaactacgtcacgttcaaccgt
gacttcttcggcagcaatgactataagaccgtggtaacgctgggcgctcaactgagcacc
ctgttggacgacggcgcttatattcagcgtggcgaacgcaagaagcaggtcaaggaattc
aaggaagccctcgactggctgatggcggaaagcaccaaacgtcacaccattcagcgatac
aaaggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggaccctgctcag
cgtcgcatgttgcgtgtgaccatcgaagacgccattggcgcagaccagatcttcaacacc
ctcatgggtgatgcggtcgagcctcgtcgtgacttcatcgagagcaatgccctggcggtt
tccaacctggacttctga
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