Pseudomonas simiae PICF7: PFLUOLIPICF708555
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Entry
PFLUOLIPICF708555 CDS
T03767
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03420
Nucleotide excision repair
pff03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PFLUOLIPICF708555 (uvrD)
03430 Mismatch repair
PFLUOLIPICF708555 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF708555 (uvrD)
Enzymes [BR:
pff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFLUOLIPICF708555 (uvrD)
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFLUOLIPICF708555 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PFLUOLIPICF708555 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJZ93585
LinkDB
All DBs
Position
complement(1875658..1877841)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLAQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIVNKGLTGRAAGALGVFVELIENLAAKCAQMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNSSSLFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccctgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgtcatcgcatcgagcagttgatg
ggcatcagcccggccggtatgtgggtgggcaccttccacggcctggcacaccgcctgttg
cgggcacactggcaggaggcgggcctggcccagaccttccagatcctcgacagcgatgac
cagcaacgcctggtcaagcgggtcatccgcgagctgggcctcgacgagcagcgttggccg
gcgcgtcaggcgcaatggttcatcaacggccagaaagacgaaggcctgcgcccacaacat
atccaggccagcggtgatttgttcctggccaccatgcgcagcatttatgaagcctacgag
gccgcctgcgtacgcgccggggttatcgatttctccgagctgctgttgcgcgccctcgac
ctgtggcgtgacaacccaggcctgctggcccattaccagaagcgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggtggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttcccagacgcggtgaccatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggccgccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaggccatc
aacctgtacgccgcgttcaacgagcacgatgaagcgcgctacgtggtggaaaccatcgaa
agcgcgctgaagaccggcctggcgcgcagcgacatcgcgatcctttaccgttccaacgcc
caatcgcgggtcttggaagaagccttgctgcgcgagcgcatcccgtaccgcatctatggc
ggccagcgcttctttgagcgcgccgaaatcaagaacgccatggcctacctgcgcttgctg
gaaggtcgcggcaacgatgcggcgctggagcgggtgatcaatatcccggcgcgcggcatc
ggcgaaaaaaccgtcgaagccatccgcgatcacgcacgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctcatcgtcaataaaggcctgactggccgcgcagccggtgcgttg
ggggtgtttgtcgagctgatcgagaacctggcggccaagtgcgcgcaaatgcccctgcat
ttgatgacccagacggtaatcgaacagtccgggctgatcgcctatcacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtgagcgccgcccgtgcc
ttcgaaaacaccgaggaagacgaagagctgacgccgctggctgcgttcctcggccacgcg
tcgctggaagccggtgatacccaggccgatgagcatgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggaatttccgtatgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacccggccgccttgaggaagaacgccgcctg
gcatacgtgggcatcacccgcgccatgcagaacctggtgatgacctacgccgagacccga
cgcctgtatggcagcgagacctacaacaaggtgtcacgcttcgtacgtgaagtgccgaag
ggtctaatccaggaagtgcgcctgtccaacagcgtcagccgcccattcggcggaggccag
cagcagaactccagcagcctgtttgccggctccgaaatcccggaaacccagttcagcctt
ggccagcaggtcaggcattcagtgttcggtgaaggcgtgatcctcaacttcgaaggcgcg
ggtgcccaggcacgggtgcaggtgaacttcgccgaaggcagcaagtggctgatgatgggt
tacgcgaaactcgaagccctctga
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