Pseudomonas simiae PICF7: PFLUOLIPICF708855
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Entry
PFLUOLIPICF708855 CDS
T03767
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLUOLIPICF708855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pff02044
]
PFLUOLIPICF708855
Secretion system [BR:
pff02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLUOLIPICF708855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
AJZ93641
LinkDB
All DBs
Position
1950314..1951648
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGSWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPQDDLSPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEALE
AARYVSQVREVRDDNAPFENRAPVAVGARALRLLTAQDGISDYAAIGLVRIKEKRADRAL
VLDDTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIQHLSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFAP
VMAALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLDSASFILVVRADVPGETLRA
RFGQQSKVGSVEHIRDLVNLQLPGITLLPLPVAPRQLPYHAGSTYYELDRGSDAWQQLGN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcggaacgcagcacttc
cagcagcatgaccgttacctggaaaacctgatcgacgcccgtagccgcccgctgtccgca
ggcagttggggtttttccgaattgctgatcgaccagggcctgctggcccagggcaagctg
gcgattgtttcggcgcgcggtctgttgcccgacggcacgccgttcaacattccccaggac
gacctgtcgccgagcccgttgaacatcgatgacaacctgcgcgatggtctggtgtacctg
gcgctgccgctcaagcgtgccggtgctcgcgatacggtggatgaaggcgaagccctggaa
gccgcgcgttacgtgagccaggtgcgcgaagtgcgcgacgacaacgcaccgttcgaaaac
cgcgctccggtggccgtgggcgcccgggccctgcgcctgctgaccgcccaggatggcatc
agcgattacgccgccatcggcctggtgcgcatcaaggaaaagcgcgccgaccgcgcactg
gtactcgacgacacctacatcccgccggtgctggacgtggccgcgagcaagccactgacg
gcatttcgcagcgaactgcttggcctgctgcaccaacgcggcgaagccctggcggggcgc
gtggtcgcctcgggcgccggtggcgcatcggagattgccgacttcatgctgctgcaactg
gtcaaccgtgcccaaccgctgatccagcatttgagccaactgagcccgctgcacccggag
cgtttcttcagcgaactggtgagcctggcgggtgagttctcgacgttctcgacctcgggc
cgacgcccccaggaatacccgcagtatcagcacgacgacctggccctgagctttgcccca
gtgatggccgccctgcgtgaagcgctgtcgatgctgatcgacagcaaggccacgccgatc
ccgattgtcgagaaagcctacggtgtccacgtggcgatgctggccgacaagaccctgctc
gatagcgccagcttcattctggtggtgcgtgccgatgtccccggcgagaccctgcgtgcg
cgcttcggccagcagagcaaggtcggctcggtggagcacatccgcgacctggtcaacctg
caactgccgggcatcaccctgttgcctctgcccgtggcgccgcgccaattgccgtaccac
gcaggttccacctattacgagctggatcgcggcagcgatgcctggcaacagttgggcaac
tccggcggcttcgccttccacatcgccgggcagttcccgggcttgaacctggccttctgg
gcgatccgaggataa
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