Pseudomonas simiae PICF7: PFLUOLIPICF708960
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Entry
PFLUOLIPICF708960 CDS
T03767
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PFLUOLIPICF708960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF708960
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF708960
Enzymes [BR:
pff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PFLUOLIPICF708960
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PFLUOLIPICF708960
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PFLUOLIPICF708960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AJZ93662
LinkDB
All DBs
Position
complement(1977423..1977686)
Genome browser
AA seq
87 aa
AA seq
DB search
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPLVQWENDKPTVVALREIAEGLMS
YEFIANAEIVEDEPLFAAFEDESNEAV
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaaccgttgaagactgcctagaacacgtggataaccgctttgagctggtc
atgctctctaccaagcgtgcccgtcaactggccactggcggcaaagagcccctggtccag
tgggaaaacgacaagcctactgttgtagccctgcgtgaaatcgctgaaggcctgatgagc
tacgagttcatcgccaacgctgaaatcgttgaagacgaaccgctgtttgcagcgttcgag
gacgagtccaacgaggccgtctaa
DBGET
integrated database retrieval system
