Pseudomonas simiae PICF7: PFLUOLIPICF709200
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Entry
PFLUOLIPICF709200 CDS
T03767
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff00300
Lysine biosynthesis
pff00470
D-Amino acid metabolism
pff01100
Metabolic pathways
pff01110
Biosynthesis of secondary metabolites
pff01120
Microbial metabolism in diverse environments
pff01230
Biosynthesis of amino acids
Module
pff_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFLUOLIPICF709200 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFLUOLIPICF709200 (dapF)
Enzymes [BR:
pff01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFLUOLIPICF709200 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AJZ93708
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All DBs
Position
complement(2025214..2026044)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRSDGQISVNM
GAPRLVPADIPFQAPEQAASYALDVDGKTVEIAAVSMGNPHAVLRVNDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRTRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHPVMMTGPASRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacgggctgggcaatgatttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaaacagtggggcgaccgtcacact
ggcattggtttcgaccagttactgatcgtcgaggctcccagcaacccggaggtggatttc
cgttaccggatctttaacgccgacggttccgaagtggaacagtgcggtaacggtgcgcgc
tgcttcgcgcgctttgtgctggacaagcgcctgaccgccaagcggcagatccgtgtcgag
accaagagcggcgtgatcgaactggatatccgcagtgacggccagatcagcgtcaacatg
ggtgcgccacgcctggtgccggcggacattccgttccaggcccccgagcaagctgccagc
tatgcactggatgttgacggcaagaccgtcgagatcgccgccgtgtccatgggcaacccc
catgccgtgctgcgggtcaacgacatcaacaacgcgcccgtgcatgaattggggccgaag
atcgaacaccacccgcgctttccggcacgggtcaacgtgggcttcctgcaggtgatcgac
cgtacccgcgcgcaattgcgtgtgtgggaacgcggcgccggcgaaacccaggcctgcggc
accggtgcttgcgccgctgccgtggccgcgatcagccaggggtggatggattcgccgctg
ctgatcgacctgcccggtggacgcttgtccattgagtgggcaggccctggccacccggtg
atgatgaccgggccggcctcgcgcgtatacgaaggacaggtccgtctatga
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