Pseudomonas simiae PICF7: PFLUOLIPICF709205
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Entry
PFLUOLIPICF709205 CDS
T03767
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff00300
Lysine biosynthesis
pff00470
D-Amino acid metabolism
pff01100
Metabolic pathways
pff01110
Biosynthesis of secondary metabolites
pff01120
Microbial metabolism in diverse environments
pff01230
Biosynthesis of amino acids
Module
pff_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFLUOLIPICF709205
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFLUOLIPICF709205
Enzymes [BR:
pff01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PFLUOLIPICF709205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJZ93709
LinkDB
All DBs
Position
complement(2026048..2027295)
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALDGVSHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVH
CFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIKAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRASEARAYDIVGPICETGDFLAKDRQLALEEGD
LLAIHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
atagcccagcgctttggcaccccgacctatgtgtattcgcgtgcgcatatcgaagcccag
taccgctcgttcaccgacgccctcgacggcgtgtcgcacctggtgtgctacgcggtcaag
gccaactccaacctcggcgtactgaatgtcctggcgcgattgggcgctggtttcgacatc
gtctcccgtggcgagctggaacgtgtgctggccgctggcggcaaggctgaaaagatcgtg
ttctccggcgtcggcaagacccgcgaagacatgcgtcgcgccctggaagtcggcgtgcac
tgcttcaatatcgaatccaccgacgagctggagcgcctgcaggtcgtggccgccgagatg
ggcgtgcgtgcgccgatctccctgcgcgtcaatccggacgtcgatgccgggacccaccca
tacatctccaccggtctcaaagagaacaagttcggcatcgctattgccgacgccgaggat
gtgtacatccgcgccgcccaactgccgaacctggaagtactgggcgtcgactgccatatc
ggctcgcaactgaccacgctgccgccattcctggatgcgctcgatcgcctgctggcgctg
atcgaccgtctcggcgaatgcggcatctacctgcaccacatcgacctcggtggcggcgtg
ggcgtgcgttatcgcgatgaagagccgccgctgattgccgactacatcaaggctgtgcgc
gagcgtatcgaaggccgcgacctgacgctgatgttcgagcctggccgctacatcgtcgcc
aacgctggcgtgctgctgacccaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aatgtcaccgccgtgacgcctcgtgcaagcgaagcccgcgcctatgacatcgtcggcccg
atctgcgagaccggtgacttcctggccaaggatcgtcagctcgcgctggaggaaggcgat
ctgctggccattcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcgggcgtaccgccgaggtgctggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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