Pseudomonas simiae PICF7: PFLUOLIPICF711805
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Entry
PFLUOLIPICF711805 CDS
T03767
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03030
DNA replication
pff03430
Mismatch repair
pff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLUOLIPICF711805
03430 Mismatch repair
PFLUOLIPICF711805
03440 Homologous recombination
PFLUOLIPICF711805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pff03032
]
PFLUOLIPICF711805
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF711805
Enzymes [BR:
pff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLUOLIPICF711805
DNA replication proteins [BR:
pff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFLUOLIPICF711805
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFLUOLIPICF711805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AJZ94195
LinkDB
All DBs
Position
complement(2553058..2554095)
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGGLAPVYIVSGDDPLLCQEAADAIRMAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGAHTQFIQIWPVDSNQLPQWIRQRLSQSGLSATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEDGQITVETVQGAVADSARFDVFGLVDAILNGEPAHALRMLEGLRGE
GVEPPVILWALARELRVLANIALQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRHSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLTLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgctcccgcccaactcgccaaacacctgcaaggtggccttgcgcctgtctat
atcgtcagcggcgatgacccgctgctgtgccaggaagccgccgacgccatccgcatggcg
gcacgccagcaaggcttcgacgaacgccaggtcttcagcgccgacgccagtttcgactgg
ggcacgctgctgcaagctggcgcaagcatgtcgctgtttgccgaaaaacgcctgctggaa
ctgcgcctgccttcgggcaagccgggcgacaaaggcgctgccgccttgatggaatactgc
tcacgcccggccgaagacacggtgctgctgatcagcctgcccaagctcgacggcagtgcg
cagaaaaccaaatggggcaaggccctggtggaaggggcccacacccagttcatccagatc
tggccagtggacagcaaccagctgccgcagtggattcgccagcgcctgtcccaatcgggg
ctgtcggcgacccaggatgcggtggagctgatcgccgcccgggtcgaaggcaacttgctt
gccgccgcccaggagatcgaaaagctcaagctgatggccgaagacgggcagattaccgtc
gagaccgtccagggcgccgtggcggatagcgcacgctttgatgtgttcggactggtggac
gcgatccttaatggcgaacccgcccacgccctgcgcatgctcgaaggcctgcgtggcgaa
ggggtggaaccaccggtgattctctgggccctggcccgtgaactgcgcgtactggccaat
attgccctgcaatacagccagggcacgccgctggacaaggccttcagccaagcccggccg
ccggtatgggacaagcgcaaaccgctgatgagcaaagcgctgcagcggcactcggcgcaa
cgctgggcgcaactcttgttggaagcgcagcgcatcgacgcacagatcaaaggccaggcg
gccggctcgccatggatgagcctgagccgtttgtcgctgttgatggccggccagcgcctg
accctccccgccgaataa
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