Pseudomonas simiae PICF7: PFLUOLIPICF712695
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Entry
PFLUOLIPICF712695 CDS
T03767
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFLUOLIPICF712695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF712695
Enzymes [BR:
pff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PFLUOLIPICF712695
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFLUOLIPICF712695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJZ94350
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All DBs
Position
2749696..2753148
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AA seq
1150 aa
AA seq
DB search
MPDATSLSAGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGKDEIPPKSLLDKAPLTWRLMRLLPEL
IDQPHFEPLQRFLTHDTDLRKRYQLAERLADLFDQYQVYRADWLEDWAAGRHQLRNGRGE
SKPLNPANCWQAELWRALLLDVGEEGMAESRAGVHQRFIERINTLEKAPGGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRNEYKRQARKAGMPVTI
DPQTLHQHAHPLLAAWGKQGRDYISLLDSYDDPNSYRAAFRDGRIDLFSDSEPTTLLNQL
QDDILELRPLNETRELWPAVDLQRDTSIRFHIAHSAQREVEILHDQLLQRFSADPSLRPR
DVIVMVPDVDSYAPHIRAVFGQLERNDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFAIKERDLPTLHRWIEGAGIRWGLNAEQRAGLGLPKELEQNS
WRFGLRRMLLGYAVGTGAACDGIEPYDEIGGLDAALIGPLVALLDALSDAHQALSLPASP
TQWGERLQRLIQLFFLPSSEHDDYLLGQLEQLRETWLETCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSDRPASVLIGQLRDHLASGWHLAN
SDIPLIEAMTQEHPLQPFSARYFHEGDALFSYAREWQLLHEASDALPTEHDLAPHQQEEP
LSLGQLQDFLRNPVKHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLNAALTR
PDQLDQTLNAQALRLQGSGLLPMVGFGECLRNELIEPLPDLLRRYQQLLALWPTPHTGAE
PVSFEHHGVQLEGWISGLHRRSDGGLLSVTTIPNSIGSIKTRKWHRLIRPWVNHVVACAC
GLPLSTGLVASDDTLLLPPLDKANAQEVLGHLLLAWHAGMSKPLPVAVKTAFAWLSQTDP
VKAEAAAVKTYEGDGLNNEGERRETPALTRQFPDYATLIASEEFEGWCETLYRPLLNAPW
RSLTGEEASA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcgacgtccctcagcgctggattcatggtggttcacggcaatcgcctggac
gaactgcgcagcctggtggtcagctggatgcgccgctaccccctggctcccctggaaaac
gaaatcgccctggtccaaagcaacggtatcgcccagtggctcaagctggccctggcggaa
gatccggaagacgacgacatggggggttgcggcatcgccgccgccatcgatgttcaacta
cccggcagctttatgtggcagctctaccgtatggtcttgggaaaagatgaaattccgccc
aaatccctgctcgataaagccccgctgacctggcgcctcatgcgcctgcttccggagctt
atcgatcaaccgcacttcgaaccactccagcgctttctcacccacgacaccgatttgcgc
aaacgctaccaactcgccgagcgtctggctgacctgttcgaccaatatcaggtctaccgt
gccgattggctcgaagactgggctgccggccgccaccagctgcgcaacggtcgaggcgaa
tccaagccactcaaccctgccaactgctggcaagccgaactatggcgagcactgctgctg
gatgttggtgaagaaggcatggccgaaagccgcgccggcgttcatcagcgctttatcgag
cgcatcaatacactggaaaaagcgcccgggggcctgccatcccgagtcatcgttttcggc
atttcctcgttgcccgcccaggcactggaagccctcgccggcctcgcgcgattcagccaa
gttctgctctgcgtgcacaacccttgccgccaccattggtccgacatcgtcgccgacaaa
gacctcctgcgtaacgaatacaaacgccaggcgcgcaaagccggcatgccggtcaccatc
gacccacaaaccctgcaccagcacgcccacccgctactggccgcctggggcaaacaaggc
cgtgactacatcagcctgctggacagctacgacgaccccaatagctaccgcgctgcattc
cgcgatggccgcatcgacctgttcagcgacagcgagcccaccacactgctcaatcaactc
caggacgacatcctggaattgcgtccactcaatgaaacacgcgagctatggcctgctgtc
gacctgcaacgtgatacctcgattcgcttccacatcgcccacagcgcgcagcgcgaagtg
gaaattctccacgaccaactgctccaacgcttcagtgccgacccctcgctgcgcccgcgg
gatgtcatcgtcatggtcccggatgtcgacagctatgcgccgcacatccgcgccgtgttc
ggccaactcgaacgcaatgacccacgcttcatcccgttcaccctgaccgaccaaggccaa
cgcggccgtgacccgctgctcatcgccgtcgaacacctgctgaaactgcccgacagccgc
ttcccggtcagcgagatcctcgatctgctcgacgtgccggccctgcgcgaacgcttcgcc
atcaaggagcgcgacctgcccacgctgcatcgctggatcgaaggcgccggcatccgctgg
gggctcaacgccgaacaacgtgccggtctgggcctgccaaaagaactggaacaaaacagc
tggcgtttcggcctgcgccgcatgttgctcggttacgccgtcggcaccggcgccgcgtgt
gatggtatcgagccctacgacgaaatcggtggccttgatgcggcgctcatcggccctttg
gtcgctttgctcgacgcactcagcgatgcgcatcaagcgttatcactgccggcttcaccg
acgcaatggggcgagcgcttgcaacgcctgatacaactgttcttcctacccagcagcgag
cacgatgactacctgctgggccaactcgaacaactcagggaaacctggctggagacctgc
gaatccgtcggcctgcaagacgaattacctctcacagtggtccgcgaggcctggcttgcg
gggctggaccaaggtcgcctgtcccaacgcttcctcgccggggctgtcaatttctgcact
ctgatgcccatgcgtgcgatcccgttcaagctcgtttgcctgctcggcatgaacgacggt
gattacccgcgcgcgcaaccaccgctggacttcgacctgatgggcagcgactaccgccca
ggcgaccgttcacgccgtgaagacgaccgctacctgctgctcgaagccctgctttcagca
cgtgaccagctctacgtcagttgggtcggccgcagcatccgcgacaacagtgaccgccca
gcgtcggtactcatcggccaactgcgtgaccatctcgccagtggctggcacctggcaaac
agtgacataccgctgatcgaagccatgacccaagagcatccgctgcaaccgttcagcgcc
cgctacttccatgaaggcgatgcgctgttcagctacgcgcgcgaatggcagttgcttcat
gaagcctccgatgccctcccgacagaacacgacctggctccccaccaacaggaagaaccc
ctgagtctcggccagctccaagacttcctgcgcaacccggtcaaacacttcttcagccag
cgcctgaaagtattcttcgaagccgccgaagtgccgctggccgacgaagagccttttgtt
ctcgacgcactgcaacgctacagcctgagtgacagcctgctgaacgccgcgctcacccga
cccgatcagctcgaccagaccctgaacgcccaggccctgcgcctgcaaggcagtggcctg
ttgccgatggttggtttcggcgaatgcctgcgcaacgaactgatcgagcctttacccgat
ctgttgcgacgctatcagcaattgctcgccctctggcctaccccgcacaccggtgccgaa
ccggtcagttttgagcatcacggcgtgcagttggaaggctggatcagcggtctgcatcga
cgcagtgatggcgggttgctaagcgttaccaccattcccaacagcatcggctcgatcaag
acccgcaagtggcatcgcttgattcgcccttgggtcaatcacgtggttgcctgtgcgtgc
ggtctaccgctgagcaccggcttggtggccagcgatgacaccctgctgctgccgcctctg
gataaagccaatgcccaggaagtcctcggccacttgctgctggcctggcatgccggaatg
agcaaaccgttgcccgtcgccgtcaaaaccgctttcgcgtggctcagccagaccgacccc
gtcaaggccgaagcagccgcagttaaaacctacgaaggtgatgggctcaacaacgaaggc
gaacgccgcgaaacgccggcgctcacccggcaattccccgattacgccacactcatcgcc
agtgaagaattcgaaggttggtgcgaaaccctgtatcgcccgctgctcaacgccccgtgg
cgatcactcaccggcgaggaggccagcgcatga
DBGET
integrated database retrieval system
