Pseudomonas simiae PICF7: PFLUOLIPICF712705
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Entry
PFLUOLIPICF712705 CDS
T03767
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFLUOLIPICF712705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF712705
Enzymes [BR:
pff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PFLUOLIPICF712705
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFLUOLIPICF712705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
AAA_22
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA_17
T2SSE
NTPase_1
AAA_28
AAA_25
AAA_5
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJZ94352
LinkDB
All DBs
Position
2756816..2758885
Genome browser
AA seq
689 aa
AA seq
DB search
MSLLPLPLEELTPLSRAADLVQLLERWVDRGWLRALDKAFVGFLHELDPQADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDLQTGAMLLPSQLLDGLDGAHWCHALAA
SHLVALAVDGRESAQSRPLVLSGKRLYLRRYWTYERRIDTALRLRLATQESVAADLPQRL
NSLFDQPPPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVDVGSP
LRIRLAAPTGKAAARLTESISQQVLSLKVPDSVKEKIPTQVTTVHRLLGSRPGTRHFRHH
IGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGFYSAETRQWLQAVSGEDLSASGLQEDFDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNPEEARKLLAARSHDDLFCVSLKGEHDHALERLVLDGQGEGAEGYRYYLNLLQS
ARPSPETPRESDAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIDG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPQVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALSPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELGHESEKTD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttgccgttaccgctggaggaactgacgcccctcagccgcgccgccgacctg
gtgcaattactggaacgttgggtcgaccgtggctggttgcgtgccttggacaaagccttt
gtcggtttcctgcacgagcttgatccacaggcggacccgctggtgctactggccgccgcg
ctgaccagccatcaattgggccacggccatgtctgccttgacctgttcgaaaccctcaag
gcgccggatttcgccctgtcgttgccgcctgaaggcgacctgcaaaccggcgccatgctg
ctgccgtcgcagttgctcgacggcctggacggcgcccactggtgccatgctctggccgcc
agtcacttggtggcgttggcagtcgatggccgcgaatccgcccaaagtcgccctttggta
ctctccggcaagcgcctgtacctgcgccgctactggacctacgaacggcgcatcgacacc
gccctgcgcctgcgtctcgctactcaggagagtgtcgccgctgatttgccgcagcgcctc
aacagcctgttcgaccaaccaccgcccgacggcgtgatcgactggcaaaaactcgcctgc
gcgttggccactcgcggcgcattcagcatcgtcaccggcggccccggcactggcaagacc
accaccgtggtgcgcttgctcgcgctgttgcaggcgccggctgtggacgtcggcagccca
ctgcgcattcgcctggccgcgcccaccggtaaggccgccgcacgcctcaccgagtccatc
agccaacaagtgctgtcgctgaaagtgcctgacagcgtgaaggaaaaaatcccaacccag
gtcaccaccgtccaccgcctgctgggcagtcgtccgggcacgcggcattttcgtcatcac
atcggcaacccattgccgctggatgtgctggtggtggacgaagcctcaatgatcgacctg
gaaatgatggccaacctgctcgacgccttgccgccccatgcacgcctggtgctgttgggc
gacaaggaccaactggcgtcggtagaagcgggcgccgtgctcggtgatttgtgccgcgac
gccgaagccggtttctacagcgccgagacgcgccaatggctgcaggccgtcagcggtgaa
gacctcagcgccagcggcctgcaggaagacttcgacggcagccatcccctggcccagcaa
gtggtgatgctgcgttactcgcgacgtttcggcgaaggcagtggcatcggccaactggcg
cgctgggtcaaccagcaaaaccctgaagaagcccgcaaactgcttgccgcgcgcagtcac
gatgatctgttttgcgtcagtctcaagggcgaacacgatcacgccctggaacgcctggtg
ctggacgggcagggcgagggtgccgagggctatcgctattacctcaacctgttgcaaagc
gcgcgtccgtcgccggaaacaccgcgtgaaagcgacgcctggacccactgggcgcaacaa
ctgctgcaagctttcgacgcgttccaactgctctgcgcggtacgcaaaggcccctggggc
gtggaaggcctgaacctgcgcatcaccgccgccctgcgcaaggtacggctgatcgacggc
gacgaacaatggtacgaggggcgcccggtgctgatgacccgtaacgattacggcctgggc
ttgatgaacggtgacatcggcatcgccctcaaattgcccgaaagcgacggcggtccccag
gtgctgcgcgtggctttcccgcgtaacgacggccagggcggcgtgcgttttgtgttgccc
agccgtttgaacgatgtggaaaccgtgtacgccatgaccgtgcataaatcccagggctcg
gaattcacgcataccgcgctgatcctgccggatgcgttgagcccggtgctcactaaagag
ctgatctacaccggcatcactcgggccaagcgttggttcagcctgatcgagccccgaggc
ggcgtgtttgaagaagccgtcaggcgtaaggtcaagcgtttgagtgggttgatgctggag
ttgggtcacgaatcagaaaaaactgactga
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