Pseudomonas simiae PICF7: PFLUOLIPICF720360
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Entry
PFLUOLIPICF720360 CDS
T03767
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLUOLIPICF720360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF720360
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF720360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
GerE
HTH_11
HTH_24
HTH_Mga
HTH_Tnp_4
HTH_3
HTH_38
HTH_20
HTH_28
HTH_IclR
HTH_Tnp_ISL3
HTH_31
HTH_17
HTH_10
DUF8612
HTH_40
DUF1804
TnsD
Motif
Other DBs
NCBI-ProteinID:
AJZ95612
LinkDB
All DBs
Position
4348676..4349218
Genome browser
AA seq
180 aa
AA seq
DB search
MHDIPAAPGDSVRQQTLTAMYSEHHGWLHGWLRKKLGCSQHAADLAHDAFIRVLMLAEPQ
QIKEPRAFLATTAGRLLIDGARRRRIEKAYMEALVIQCEDAGMPDPAAIHVALQALERIA
EMLAGLPAKAREAFLLSRLDGLTYSEIATRLDVSASTVKNYISSALVHCYHSLHPADPLA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacattccggccgcgccaggcgactccgtccggcagcagacccttacggcgatg
tacagcgagcaccacggctggttgcacggctggctgcgcaagaaactcgggtgttcccag
catgcagcggacctcgcccatgacgccttcatccgcgtcttgatgctggccgaacctcaa
cagatcaaagagccccgcgcgttcctggccaccacggcagggcggttgctgatcgacggc
gcccgtcgtcgtcgcatcgaaaaagcctacatggaagccctggtgatccagtgcgaggac
gctggcatgcccgacccggccgcgattcatgtcgcgctgcaagccctggaacgtattgcg
gagatgcttgccgggctgcctgccaaggcgcgcgaagcgttcctgctgagccgcctcgac
gggctgacctacagcgaaatcgccacacgcctggacgtgtctgccagcaccgtcaaaaac
tacatctccagtgccttggttcactgctaccacagcctgcacccggcagacccgctggca
tga
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