KEGG   Pseudomonas simiae PICF7: PFLUOLIPICF720705
Entry
PFLUOLIPICF720705 CDS       T03767                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff  Pseudomonas simiae PICF7
Pathway
pff02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pff00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PFLUOLIPICF720705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pff03021]
    PFLUOLIPICF720705
Transcription machinery [BR:pff03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PFLUOLIPICF720705
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_28 GerE NirdL-like_HTH
Other DBs
NCBI-ProteinID: AJZ95671
LinkDB
Position
complement(4430974..4431486)
AA seq 170 aa
MSTSFTHLYGTHHVWLLGLLRRRLNDRWDAADLAHDTFIRILSRPPAETDPVRQRSYLAT
IARGLCIDHWRRRQLERTWLQTLAERPEALQPSPEQRAIIVETLVEVDAMLARLPKKVSE
AFLLAQLHGLPYKQIAEQLGVGERMVKKYMAQALLHCAILEAELDGMLVQ
NT seq 513 nt   +upstreamnt  +downstreamnt
gtgtcgacttcttttacccacctctacggcacccatcacgtttggctgctcggcctgctg
cgccggcgcctgaacgaccgctgggatgccgccgacctggctcacgacacgtttatccgg
attctcagccgcccaccggccgagaccgaccccgtccgccaacgctcctacctggccacc
atcgcccgtgggctgtgcatcgaccattggcgccggcgccagctcgaacgcacgtggctg
caaaccctggccgaacggccggaagcgctgcaaccgtcgccggagcaacgggcgatcatc
gtcgagacactggttgaggtggacgccatgctcgcgcgactgccgaagaaagtcagcgaa
gccttcctgctcgcccagttacacggcctgccctacaagcagatcgccgagcagcttggc
gtgggcgagcgcatggtcaagaagtacatggcccaggccctgctgcattgcgcaatcctg
gaagccgaactcgacgggatgctcgtgcaatga

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