Pseudomonas simiae PICF7: PFLUOLIPICF720705
Help
Entry
PFLUOLIPICF720705 CDS
T03767
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLUOLIPICF720705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF720705
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF720705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
GerE
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AJZ95671
LinkDB
All DBs
Position
complement(4430974..4431486)
Genome browser
AA seq
170 aa
AA seq
DB search
MSTSFTHLYGTHHVWLLGLLRRRLNDRWDAADLAHDTFIRILSRPPAETDPVRQRSYLAT
IARGLCIDHWRRRQLERTWLQTLAERPEALQPSPEQRAIIVETLVEVDAMLARLPKKVSE
AFLLAQLHGLPYKQIAEQLGVGERMVKKYMAQALLHCAILEAELDGMLVQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacttcttttacccacctctacggcacccatcacgtttggctgctcggcctgctg
cgccggcgcctgaacgaccgctgggatgccgccgacctggctcacgacacgtttatccgg
attctcagccgcccaccggccgagaccgaccccgtccgccaacgctcctacctggccacc
atcgcccgtgggctgtgcatcgaccattggcgccggcgccagctcgaacgcacgtggctg
caaaccctggccgaacggccggaagcgctgcaaccgtcgccggagcaacgggcgatcatc
gtcgagacactggttgaggtggacgccatgctcgcgcgactgccgaagaaagtcagcgaa
gccttcctgctcgcccagttacacggcctgccctacaagcagatcgccgagcagcttggc
gtgggcgagcgcatggtcaagaagtacatggcccaggccctgctgcattgcgcaatcctg
gaagccgaactcgacgggatgctcgtgcaatga
DBGET
integrated database retrieval system