Pseudomonas simiae PICF7: PFLUOLIPICF721265
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Entry
PFLUOLIPICF721265 CDS
T03767
Name
(GenBank) type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLUOLIPICF721265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pff02044
]
PFLUOLIPICF721265
Secretion system [BR:
pff02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLUOLIPICF721265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AJZ95752
LinkDB
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Position
4547492..4548967
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AA seq
491 aa
AA seq
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MTTQQHSLPAQTADQYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVK
KRLVDRMIAEIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTNFRENIKIELLNISR
QDLLEDFEDSPEVTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSV
ACMAHAPFIAAAGPGFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRTPYDPLECPVKTFAYQENVVNSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFHSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKHFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacaacagcactcactgcctgcacaaaccgctgatcaatacagcattctcgac
aacatcgttgcacagactctgctgagtgcggacgacgaggcgtatggcattgccaagcgt
ggcgtctcggcgttcatcgaagagctgatcaagccgcagaaccgtggcgagcccgtcaag
aagcggctggtggatcggatgattgccgagatcgacacgaagctcagtcttcagatggat
gaaattctgcaccacccggatttccaggccttggaagcttcctggaaaggtttgcagttg
ttggttgatcgcaccaattttcgcgagaacatcaagatcgaactgctgaacatctctcgg
caagacctgctggaagatttcgaggactctccggaagtgacccagtccgggctttacaag
catatctacagtgcggaatacggtcagttcggtggtcagcctgtgggcgcgattatcgcc
aattactttctgtcccccagcgcacccgacgtgaagctgatgcaatacgcatccagcgtg
gcctgcatggcccatgcgccgtttatcgcagctgccgggcctgggttcttcgggttggaa
agtttcaccggcctaccggatctcaaagatctgaaagaccatttcgaaggccctcaattc
gccaaatggcaaagctttcgccaaagcgaagacgcacgctatatcggcttgaccgtgccg
cgtttcctgcttcgtacgccctacgatccccttgaatgcccggtcaagacctttgcttat
caggaaaacgtggtcaatagccatgagcactacctgtggggcaacactgcctacgccttt
gctacgcgtttgaccgacagtttcgcgcgctttcgctggtgtccgaacatcatcggcccg
caaagcggtggcgcggtggaggatttgccgctgcatcacttccacagcatgggtgaaatt
gaaaccaagattccgactgaagtgctggtttccgatcggcgtgaatacgagctggcgcag
gagggcttcattgccttgacgatgcgcaagggcagcgacaatgcggcatttttttccgcc
agttcggtccagaagccgaaacacttcggtctcagtccagaaggcaaggaggccgagctg
aattaccgcctgggcactcaactgccctacatgatggtggtgaatcgcctggcccactac
ctcaaggtcttgcagcgtgagcaattggggtcgtggaaggagcgcaccgacctggagctt
gaactcaacaagtggattcgccagtacgtcgccgatcaggaaaaccccagtgccgaagtg
cgtgggaggcgacccttgcgtgcggcccgcatcgttgtcagcgatgtcgacggcgaaccc
ggttggtaccgcgtcaacttgagtgtgcgcccgcatttcaagtacatgggggcggatttc
acattgtccttggtcggcaagctcgacaaagaatga
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