Pseudomonas simiae PICF7: PFLUOLIPICF721310
Help
Entry
PFLUOLIPICF721310 CDS
T03767
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLUOLIPICF721310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pff02044
]
PFLUOLIPICF721310
Secretion system [BR:
pff02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLUOLIPICF721310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AJZ95759
LinkDB
All DBs
Position
4557957..4559285
Genome browser
AA seq
442 aa
AA seq
DB search
MLVHNVIWQEGMLLRPQHLQHNDRYYHRQLNRTRLLSSDAWGFLTLDLDLQYLNLGKVVV
NQASGVLPDGSLFELSGAMEPLVLQVPANAGRQAVYLALPLATENQVEVRRKEQSDVLAR
YVACETEIGDSNAGADSRCQINCARPDLRLMLGEGPSDAFYVKLQVAQVQDSTREDGVSL
DADFVPTFIYLQGTGYVSSCIKEVISLLATRGDAIAARIQGSGASTGAQVGDFLMLQLIN
RAELILRHYLVQAQVRPERLYRELLSILGELSTFANDNKRAQLAVHYRHGDQGASFRGLM
EGLRTVLSSVLEQHAIELVLQQRQYGVLVCPVSDLKLLGTATFILAATAQCDSEELRHRL
PAHLKIGPVERIRELVNLHLAGIKVQPLPVAPRQIPYHAAKTYFMLELSPRDIAQLEQSG
GFAFHASGEFAELELNFWAIRN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgctggtccataacgttatctggcaagagggcatgctgttgcggccccagcacttgcaa
cacaacgaccgctactaccatcgacagctcaaccgaactcggttgctgagcagtgatgcg
tgggggttcctgaccctggacctcgatttgcagtacctcaatctgggcaaggtggttgtc
aaccaggccagtggagtattgccggacggcagcttgttcgagttgagcggcgcgatggag
cccttggtgttgcaggtgcctgccaacgcgggcaggcaagctgtttacctggcgttgccg
ctggcgacggagaatcaggtcgaagtgcgcaggaaggagcaaagcgatgtgctggcacgc
tacgtcgcctgtgaaacagagatcggcgattccaacgctggcgccgattcgcgttgccag
atcaactgcgcacgcccggacttgcgcctgatgctgggcgaggggcccagtgatgcgttc
tacgtgaaactccaggtcgcccaagtgcaggattcgacgcgcgaagacggcgtaagcctg
gatgcggattttgtgccgacgttcatctatctccagggcaccggttatgtgtcgtcatgc
atcaaggaggtgatcagcctgctggcgacgcgtggcgatgcgattgcagcgcgaatccag
gggagtggcgcctcgacaggcgcacaggtcggcgactttctaatgctgcaactgatcaat
cgtgccgagttgatcctgcgtcactacctggtacaggcccaggtgcgaccggagcggctg
tatcgagagttgctgtcgatcctcggtgagctgtcgacgttcgccaacgacaacaagcgc
gcgcaacttgccgtgcactacaggcatggtgatcagggggcgagctttcgtgggctgatg
gaggggcttcgcacagtgttgtcgtcggtgctggagcaacatgccatcgagctggtgttg
caacagcggcaatacggggtgctggtttgcccggtcagcgatctcaagttgctcggcact
gccacattcattttggccgccaccgcccaatgtgattcggaagagcttcgccatcgtttg
ccagcgcatctcaagatcggtcccgtggaacggatccgcgagctggtgaacctgcacctg
gccggtatcaaggtacagccgctgccggtcgcaccgcggcagattccatatcacgccgcc
aaaacctatttcatgctcgaactcagtccgcgtgacatcgcgcagttggagcagtcgggt
ggttttgccttccacgcgagcggtgagttcgccgagctggaactcaacttctgggctatc
aggaactga
DBGET
integrated database retrieval system