Pseudomonas simiae PICF7: PFLUOLIPICF721465
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Entry
PFLUOLIPICF721465 CDS
T03767
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pff
Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF721465
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFLUOLIPICF721465
Archaeal homologous recombinant proteins
PFLUOLIPICF721465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Snapin_Pallidin
ABC_tran
nSTAND3
ATS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJZ95788
LinkDB
All DBs
Position
complement(4599544..4603182)
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKEAREAHKQLQDQATGVVPLAAEARAELDQQFD
AAQQHLKTQQAQLKQLELQHTWLKELREWQERQLAATEQLQRAQAEWDNQGQQRDDLSRL
DQLAPQRHQFARQAELSTLLAPLAAQIQLHRQQQGELHTRQEQAQQQQASAQTALAQALK
NQADAVPLLRQAFEEQSTLAHLTKELAKRIEDKQQHESACIEGQRQLTGLLEKQNQVAER
LQRLSTELDRSAALAPLSDAWTAYRDRLQQLMLIGNRLNKGQAELPQLEQRATSAAEQFT
QQREALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLTRLWDNQQQLDQQAAT
LTQKLTDAQQQREQLNQAGLQTKAELSVAEQTLNVTKQLLERQRLARSASVEELREQLQD
DQPCPVCGSHEHPYHQPEALLQSLGRHDENEEAVAQKAVDTLKEKLTELRGEVGGLIAQQ
KEYLQQQEHLATQQQALKPSLDAHPLYASLLNQETAKRSAWLEQQLGQLTQSISQDEQRQ
GALLNLQQNAGRLQQQLQAAQDASQQARQLLVDQQRELAGDRERLDQELSAFANLLPADT
LEGLRAEPAATFMQLDQQVNQRLEQLGHQRDELAEQQDRQQAIEKEQTHQQHRQQQLDAL
LQQVNELASQQQTAQAKLSALLGEHSSAEHWQQQLEQAVTQSRQSETDANKQLQEIHNAL
IELAADLKAQQEREHALQAEHHALATRISEWRALHPELDDAGLSHLLAYDDAQVSQLRQQ
LQLSEKAVEQAKVLLQEREQRLADHQALHNGNLEAQALDSALATLNQQLTEGEKICAELR
ARQSEDQRRQEANQAFAEHIAKAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctcgcctccctggcgggcccgtttgagatc
gacttcaccgccgagccgctggccagtgccggtttgttcgcgattaccgggccgaccggc
gccggtaaaagtaccctgctcgatgccttgtgcctggcgctgtttggcgcggtgccgcgc
ctgggcgataccggccaggcgaagatgccggatgccgacagcgacatttccattggtgac
ccgcgcaccttgctgcggcgtggcaccggtggcggttatgccgaggtggacttcgtcggc
gtcagtggccgtcgctaccgcgcacgctgggaagccaaccgcgcacgggacaaagccagc
ggcaaattgcagaacagccgccaaagcctgatcgacctggacagtgaccaactgctggcc
agccagaaaaccgaatacaagacccaactggaactggccctgggcctgaacttcgaacag
ttcacccgtgccgtgttgctcgctcaaagtgagttcagcgccttcctcaaggccaacgac
aatgagcgcagcgaactgctggaaaaactcaccgacacagccctttacacccagctcggt
cggcgcgcgttcgacaaggccaaagaggccagggaagcgcataaacagctacaggaccag
gcgaccggtgtggtgccgctggccgcggaagcccgtgccgaactggatcagcaattcgac
gcggcgcaacaacacctcaagacccagcaagcccagctcaagcagctggagttgcagcac
acctggctcaaggaactgcgcgaatggcaagagcgccaactcgccgctaccgaacagcta
cagcgggcgcaggccgagtgggataaccagggccagcaacgtgacgacctgagccgcctg
gatcagttggcgccacagcgtcaccagtttgcgcgccaggcagagctgagcaccctgctt
gcgccgctggccgcgcagatccagttgcatcgccaacaacaaggcgaactgcatactcgc
caggaacaggcccaacaacagcaagccagcgcgcaaaccgcattggcgcaagccctgaaa
aaccaggctgatgccgtgcctttgctgcgccaggccttcgaagaacagagcaccctcgcc
cacttgaccaaagagttggcaaagcgcatcgaggacaaacagcaacacgaaagcgcctgc
atcgaaggccagcgccagctcactggcctgctggaaaaacagaaccaggtcgccgaacgc
ttgcaacgcctgagcaccgagcttgaccgcagcgcggcgctggcaccgctgagcgacgcc
tggaccgcctaccgcgaccgcttgcaacagttgatgctgataggcaaccgcctgaataaa
ggccaagccgaattgccgcagttggagcaacgtgcgaccagcgccgccgaacagttcacc
cagcaacgcgaagccttggacctgctgtatcaggaggccggtgccgagcctcacgccgtg
gccgagcagatccaactgctggccagcctgctgcaagacaatcgcaaacagcagcgcgcg
ttcgaagatctgacacgcctgtgggacaaccagcagcagttggaccaacaagccgctacc
ttgacgcaaaagctcaccgatgcccaacagcagcgcgagcagttgaaccaggccggcctg
caaaccaaggcagagctgagcgttgccgaacagacgctaaacgtgaccaaacagctgctg
gaacgccagcgcctggcccgcagcgccagcgtcgaagagttgcgcgagcagttgcaggac
gaccagccctgcccggtgtgcggcagccacgaacatccgtaccaccagcccgaagccctg
ttgcaaagcctcggtcgtcatgacgaaaacgaagaagccgtggcgcagaaagcggtcgat
acactcaaggaaaagctcaccgagttgcgtggcgaagtgggcggtttgatcgcccagcag
aaggaatacctgcaacagcaggaacacctggcgacgcaacagcaagcactcaagccgagc
ctggatgcacacccgctgtacgcgtcgttgctcaaccaggaaactgcgaaacgcagcgcc
tggctcgaacagcaactgggccaactgacccagagcatcagccaggacgaacaacgccaa
ggcgccctgctcaatctgcaacaaaacgccgggcgcctgcagcagcagttgcaagccgcc
caggacgcgagccagcaggcccgtcaattgttggtcgaccagcaacgcgagctggccggt
gaccgcgaacgcctcgaccaggaattgagcgccttcgccaacctgctgcccgcggacacc
ctggaaggtctgcgcgccgagccggccgccaccttcatgcagctggaccagcaggtcaac
cagcgcctggaacagctgggccatcaacgcgatgagctggctgagcaacaagatcgccaa
caggcgatcgagaaggaacagactcaccagcaacatcgccagcaacaactcgacgccctg
ctccagcaggtcaacgagctggcgagccaacagcaaacggcccaggcaaaactcagcgca
ctgctgggcgagcactccagcgccgaacactggcagcagcagctggaacaggccgtgacc
cagtcacgtcaaagcgaaaccgacgcaaacaaacagctgcaagagatccacaatgcactg
atcgaactggccgccgacctcaaggcccagcaggaacgcgaacacgcgttgcaggccgaa
caccatgccctcgccacgcgcatcagcgaatggcgtgccctgcacccggaactcgatgac
gcagggcttagccatttgctggcctacgatgacgcccaggtcagccaattgcgccaacag
ttgcagctcagcgaaaaagccgtcgaacaggccaaggtgctgctgcaagaacgcgaacag
cgcctcgccgaccaccaggccctgcacaatggcaatcttgaggcccaagccttggacagc
gccctggccacgctcaaccagcaattgaccgaaggcgagaaaatctgcgccgaactgcgc
gcacgccagtccgaagaccagcgccgccaggaggccaaccaggccttcgccgagcacatc
gccaaagcctatgacgagtggcaacgctgggcacgcctgaacgcgctgatcggctcggcc
accggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgttggtgcaccac
gccaacgtgcaactgcgtcagctggtgcggcgttaccgccttaagcgtggcggcagcatg
cttggcctgttggtgatggacacggaaatgggcgatgaattgcgctcggtgcattcgttg
tccggcggcgaaaccttcctggtgtccctggcgctggccttgggcctggcgtcgatggct
tccagcacgttgaagatcgagtcactgtttatcgatgagggcttcggcagcctcgacccg
gaatcgttgcaattggcgatggatgcgctggatggcttgcaggctcaaggccgtaaggtt
gcggtgatctcccacgttcaggaaatgcacgaacgcattcctgtgcagattcaggtcaag
cgccagggcaatggcttgagcaccctggaggtcaaatga
DBGET
integrated database retrieval system
