Pseudomonas simiae PICF7: PFLUOLIPICF721470
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Entry
PFLUOLIPICF721470 CDS
T03767
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pff
Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF721470
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFLUOLIPICF721470
Archaeal homologous recombinant proteins
PFLUOLIPICF721470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AJZ95789
LinkDB
All DBs
Position
complement(4603179..4604420)
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLGQLKTHLPDVLLIAGDIFDTVNPPLKAQ
ERLYDFIISAHEQNPKLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDNGQLDA
ERLLIPLPDAKGKIAAWCLALPFLRPAEVTGAHLGDDYLRGIGQVHEWLIAAANAKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFDRSVAYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYKHQILDVTFQGQCLVSVEPLLIPRSVDLQRLEAAPLADILKAL
AELPDIDLLAETQRHPWLEVRVRLDEPQPDLRQQIESALQGKAVRLVRIAAEYAGTGSRE
DEGDDRLIDLDQLTPQELFSRAWQDSYGSDVDEQTLKDFAVLLQEVQQEGEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctgggccaaaacctccatggccaggaacgc
gacttcgaacacgcctgtttccttgagtggctgctgggccaactgaaaacccatctcccg
gatgtgctgctgatcgccggcgatatcttcgacacggtcaacccgcccctcaaggcccag
gagcggctgtatgacttcatcatcagcgcccatgaacagaaccccaagctgaccatcgtg
atgatcgccggcaaccacgattccggctcgcgtatcgagctgcccgcgccgttgatgcgg
cgcctgcgtacccatgcgttgggccgcgtgctgtggctggataacggccaactcgacgcc
gaacgcctgctgattccgctgccggatgccaaaggcaagattgccgcctggtgcctggcg
ttgccgttcctgcgtccggcggaagtcaccggtgcgcacttgggtgacgactacctgcgc
ggcatcggccaggtgcatgaatggctgatcgccgccgccaacgccaagcgcaaaaaaggc
caggcgctgattgccatcagccacgcgcacatggccggtggttcggtgtcggaagactcc
gagcgcagcctgatcatcggcaatgccgaggcgctgccggccagcctgttcgatagaagt
gtcgcctacgttgccctcggccatttgcacaagccgcaaaaggtcaatggcgaagaacgc
attcgctacagcggctcgccgattccgctgtcgttttccgaaatcggctataaacaccag
attctcgacgtgacgtttcagggccaatgcctggtgagtgtcgaaccgctgctgatcccc
cgctcggtcgacctgcaacgcctggaagccgcgcccctggccgatatcctcaaggccttg
gccgagttgccggatatcgacctgcttgccgaaacccagcgccacccctggctcgaagtt
cgcgtacgcctggatgaaccacaacccgatctgcgtcagcagatcgaaagcgccctgcaa
ggcaaggccgtgcgcctggtgcgcatcgccgccgaatacgccggtaccggcagccgtgag
gacgaaggcgacgaccgcctgatcgatctcgaccagctcacgccccaggaattgttcagc
cgcgcctggcaggacagttatggcagtgacgtggatgaacagaccttgaaggacttcgcc
gtgctgctccaggaagtgcaacaggagggcgaacagccatga
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