Pseudomonas simiae PICF7: PFLUOLIPICF722070
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Entry
PFLUOLIPICF722070 CDS
T03767
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff00500
Starch and sucrose metabolism
pff01100
Metabolic pathways
pff01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PFLUOLIPICF722070
Enzymes [BR:
pff01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PFLUOLIPICF722070
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AJZ95877
LinkDB
All DBs
Position
complement(4736819..4738978)
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AA seq
719 aa
AA seq
DB search
MRKPDKTPSTPGNEPSRIREGLPFPLGATWDGLGVNFALFSANATKVELCLFDDSGEVEL
ERIELPEYTDETFHGYLPDAHPGLIYGYRVYGAYDPANGHRFNHNKLLIDPYAKQLVGEL
KWSEALFGYTIGHPDDDLSFDERDSAPFVPKCKVIDPAHTWGNDQPVRVPWDRTIIYETH
LRGISMRHPSVGESVRGTCAGLMEDDVLKHIRQLGVSSVELLPVHAFVNDQHLLQKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEQKLEVILDVVYNHTAEGNERGPTLSM
RGIDNASYYRLMPDDKRFYINDSGTGNTLDLSHPCVLQMVTDSLRYWANEMHVDGFRFDL
ATILGRYRDGFDERHSFLVACRQDPVLRQLKLIAEPWDCGPGGYQVGNFPPGWVEWNDRF
RDTVRAFWKGDDGQLADFAGRMTASGEMFNHRGRRPYSSVNFITAHDGFTLHDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPTDDPEINELRLRQMRNFFATLLLAQGTPMIVAGD
EFARTQHGNNNAYCQDSEIGWVNWDLDDDGKALLKFVKRLIKLRLAYPILRRGRFLVGDY
NEDIGVKDVTWLAPDGNEMTTEQWEDSHGRCLGMLMDGRAQETGIRRAGADATLLLVVNA
HHDMVNFRLPPVPEGEFWTCMLDTNSPAVRGQERFDFDHEYAVTGRSLLLFELQREDEV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacccgataaaaccccttcgacgccgggcaacgagccgtcgcgaattcgtgaa
ggtttgcccttcccccttggcgccacttgggacggcctgggcgtcaactttgccttgttc
tcggccaacgcgaccaaggtcgagctgtgcctcttcgatgattccggcgaagtggaactg
gagcgaatcgaactgccggaatacaccgacgaaaccttccacggttacctgcccgacgcc
caccccgggctgatttacggctaccgcgtgtacggcgcgtatgacccggccaatggccat
cgtttcaaccacaacaaattgctgatcgacccctatgccaagcaactggtgggcgaactg
aagtggtccgaagcactgtttggctacaccatcggccacccggacgacgacctcagtttc
gacgaacgcgacagtgcgcccttcgtgcccaagtgcaaggtcatcgacccggcacacacc
tggggcaatgaccaacccgtgcgtgtgccatgggatcgcacgatcatctacgagacccac
ctgcgcggcatcagcatgcgccacccttccgtgggcgaatccgtgcgcggcacctgcgcc
gggctgatggaagacgacgtactcaagcacattcgccagttgggcgtatcgtcggtcgaa
ttgctgcccgtgcatgccttcgtcaatgaccagcacctgctgcaaaaaggcatgacgaac
tattggggttacaacagcatcgcgtttttcgcccctgacccgcgttacctggccagcggc
aagatcgccgagttcaaggaaatggtcgcgcacctgcatgagcagaagctggaagtgatt
ctcgacgtggtctacaaccacaccgccgaaggcaacgagcgcggcccgaccctgtccatg
cgcggtatcgacaacgcgtcgtactaccgtctgatgcccgatgacaagcgcttctatatc
aacgattccggcaccggcaataccctggacctgagccatccgtgcgtgttgcagatggtc
accgactccttgcgttactgggccaatgagatgcacgtcgacggtttccgcttcgacctg
gcgactattcttggccgttaccgcgatggtttcgatgagcgccacagtttcctggtcgcc
tgtcgccaggacccggtattgcgccagctcaaactgatcgccgagccctgggactgcggc
ccaggcggctatcaggtgggtaacttcccaccgggctgggtcgaatggaacgaccgtttc
cgcgacaccgtgcgcgcgttctggaaaggcgatgacggccagttggcggattttgccggg
cgcatgaccgcttcgggcgagatgttcaaccatcggggccgccgcccctacagctcggtg
aacttcatcaccgcccatgatggtttcaccctgcacgacctggtgtcctacaacgacaag
cacaacgaagccaacgacgaaaacaaccaggacggcagcaacaacaacctgtcctggaac
cacggcgtcgaaggaccgaccgatgacccggaaatcaacgaactgcgcctgcgccagatg
cggaattttttcgccaccctgctgctggcccaaggtacaccgatgatcgtggcgggtgat
gagttcgcccgtacccagcacggcaacaacaacgcctactgccaggacagcgagatcggc
tgggtcaactgggacttggacgacgacggcaaggccctgctcaagtttgtgaaacgcctg
atcaaactgcgcctggcctacccgattctgcggcgtggacgcttcctggtgggcgactac
aacgaagacatcggcgtgaaggacgtcacctggctcgcgccggatggcaatgaaatgacc
accgaacagtgggaagacagccacggccgttgcctggggatgctgatggatggccgtgcg
caggaaaccgggatccgccgtgccggcgcggatgccaccttgctgctggtggtcaacgcc
catcacgacatggtcaatttccgtctgccaccggtgcccgaaggcgagttctggacctgc
atgcttgataccaattccccagcagtgcggggccaggagcgctttgatttcgatcatgag
tacgcggtgaccggccgttcgttgctcctgtttgaattgcagcgtgaagacgaggtgtga
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