Pseudomonas simiae PICF7: PFLUOLIPICF722535
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Entry
PFLUOLIPICF722535 CDS
T03767
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pff
Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pff03032
]
PFLUOLIPICF722535
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF722535
Enzymes [BR:
pff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PFLUOLIPICF722535
DNA replication proteins [BR:
pff03032
]
Prokaryotic type
DNA Topoisomerases
PFLUOLIPICF722535
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PFLUOLIPICF722535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF5586
Motif
Other DBs
NCBI-ProteinID:
AJZ95942
LinkDB
All DBs
Position
complement(4829980..4831017)
Genome browser
AA seq
345 aa
AA seq
DB search
MSDSALPRDLHYVDDTQPGIRRKTVRGRFQYFDPQGVRITDAEEIKRLNALAVPPAYTDV
WICADPRGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQEFGNALPKLRKQLEAKIA
EPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIQFQFRGK
SGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEDGERHTVSSHDVNDYLHSLTGADFT
AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIHPAVL
EHFSLGELSKLPKPRLRKGLKAEEVALAMFLEQLAADLPKKAKTG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgcactgccccgcgacctgcattacgttgacgacacccagcccggcatc
cgccgtaagacagtgcggggcaggttccaatacttcgacccccagggcgtgcgcattacc
gatgccgaggagatcaagcgcctgaacgccctggcggtcccgccggcgtacaccgacgta
tggatctgcgccgacccgcgcgggcatctgcaagccaccggccgcgacgcccgtggacgt
aagcaataccgttatcacccgcgctggcgcgaggtgcgcgacagtgacaagtactcccgg
ttgcaggagttcggcaacgccctgccgaaattgcgcaagcagttggaggcaaaaatcgcc
gaacccggcttcacccgtgaaaaagtcttggccacggtggtgatgctgctcgacgccaca
ctgatccgcgtcggcaatacccagtatgcgcgggacaacaaatcctacgggctgaccacc
ctgcgcacccgccatgtggatgtgaaaggcagcgaaatccagttccagtttcgcggcaag
agtggcgtggagcaccagatcagcgtcaaggaccgccgcttggccacggtggtcaagcgc
tgcctggaattgccagggcagaacctgttccagtacctggacgaggatggcgagcgccac
accgtcagctcccacgacgtgaatgactacctgcacagcctcactggcgccgactttacc
gccaaggactaccgcacctgggccggcaccgccatggcgctggccgtgttgcgggaattg
gagtggcagcccgagtccgatgccaaaaggcacgtggtggcgatggtcaaggatgtcgcc
aagcagctgggtaacaccccggcggtgtgccgcaagtgttacatccaccctgcggtgctg
gagcatttcagcctcggcgaactctccaaattgcccaagccgcggttgcgcaaagggctc
aaggctgaagaagtggccttggcgatgttccttgagcaactggcggcggacttgccgaaa
aaagccaagacgggttag
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