Pseudomonas simiae PICF7: PFLUOLIPICF724460
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Entry
PFLUOLIPICF724460 CDS
T03767
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLUOLIPICF724460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF724460
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF724460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_11
PhyR_sigma-like
HTH_7
DUF6362
RovC_DNA-bd
HTH_38
HTH_24
HTH_Tnp_4
HVO_A0261_N
HTH_Tnp_ISL3
HTH_29
HTH_28
Xre-like-HTH
Phage_terminase
DUF8073_M
TnsD
HTH_40
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AJZ96188
LinkDB
All DBs
Position
complement(5236747..5237265)
Genome browser
AA seq
172 aa
AA seq
DB search
MNDVVVPTHAPELTLSSLYRDHRSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQ
MQEPRAYLVTVGKRLLVNFHQRRSLEQAYLNALASLPEACVPSPEQRWLLLETLQALDEL
LDGLPVLVRRAFLWSQLEGLGYRDIAERLDVSERTVKRYMAQAYEHCLLVDL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgttgtagttccgacccacgcccccgaactgaccttgtcgagcctgtaccgc
gaccaccgcagctggctggaaagctggctgcgccggcgtctgggcaatgcctgggatgcg
gctgacctgagccaggataccttcttgcgtgtgctggccagcgctcagccgatcgcgcag
atgcaggagccgcgtgcctatctggtgacggtcggcaagcgcctgctggtgaatttccat
cagcggcgcagtcttgaacaggcttatctgaatgccttggccagcctgccggaagcctgc
gtgccgtcgcccgaacaacgctggctgctgctggaaaccttgcaagccctggatgaattg
ctcgatggcttgccggtgctggtccgccgtgcgttcctgtggagccaactggaaggcctg
ggctatcgggacatcgccgagcgcctggacgtgtcggagcgcacggtaaaacgctatatg
gcccaggcttacgaacattgcctgctggtggacctgtga
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