Pseudomonas simiae PICF7: PFLUOLIPICF725155
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Entry
PFLUOLIPICF725155 CDS
T03767
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff03030
DNA replication
pff03430
Mismatch repair
pff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLUOLIPICF725155
03430 Mismatch repair
PFLUOLIPICF725155
03440 Homologous recombination
PFLUOLIPICF725155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pff03032
]
PFLUOLIPICF725155
03400 DNA repair and recombination proteins [BR:
pff03400
]
PFLUOLIPICF725155
Enzymes [BR:
pff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLUOLIPICF725155
DNA replication proteins [BR:
pff03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFLUOLIPICF725155
DNA repair and recombination proteins [BR:
pff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFLUOLIPICF725155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJZ96314
LinkDB
All DBs
Position
complement(5406269..5407015)
Genome browser
AA seq
248 aa
AA seq
DB search
MAIRSVVLDTETTGMPVTDGHRIIEIGCVELMGRRLTGRHFHVYLQPDRDSDEGAIGVHG
ITDEFLKGKPRFAEVADEFFEFINGAQLIIHNAAFDVGFINNEFALMGQTDRADISQHCS
ILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLTMTGGQTSLS
LAGNASDGSGSAEGSGNRPSEIRRLPADRKPTTIIRASEQDLAEHAARLEAIAKSAGAPA
LWSTLTQQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccatccgatctgttgtactcgataccgaaaccaccggcatgccggtgaccgacggc
caccggatcattgaaatcggctgtgtcgaattgatgggtcggcgcctcaccgggcgtcac
ttccacgtctacctgcaaccggaccgcgacagtgacgaaggcgcgatcggcgtccacggt
atcactgacgaattcctcaagggcaagccgcgtttcgctgaagtcgccgatgagttcttc
gaattcatcaacggcgcccagctgatcatccataacgcggcgtttgacgtcggcttcatc
aacaacgaatttgccctgatggggcagaccgatcgcgcagacatttcccagcactgctcg
atcctcgacaccttgatgatggcccgtgagcgtcaccccggccagcgcaacagcctcgat
gccttgtgcaaacgttatggcgtcgataactcgggccgtgaactccacggcgccttgctc
gactccgagattcttgccgacgtctacctgaccatgaccggcgggcagaccagcctgtcc
ctggccggtaacgcctctgacggcagcggctcggcggagggttcgggtaatcgcccttcg
gaaatccgccgcttgccggccgaccgcaagccaaccacgatcatccgcgccagtgagcag
gatctggccgagcatgcggcgcggttggaagcgattgccaaatcggcgggtgcgccggcg
ttgtggtcgaccctgacccaacaatga
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integrated database retrieval system
