Pseudomonas simiae PICF7: PFLUOLIPICF727205
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Entry
PFLUOLIPICF727205 CDS
T03767
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pff
Pseudomonas simiae PICF7
Pathway
pff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLUOLIPICF727205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pff03021
]
PFLUOLIPICF727205
Transcription machinery [BR:
pff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLUOLIPICF727205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_11
HTH_DeoR
HTH_20
HTH_IclR
HTH_38
HTH_31
WSD
GerE
HTH_10
HTH_28
SpoIIID
HTH_7
LacI
Motif
Other DBs
NCBI-ProteinID:
AJZ96643
LinkDB
All DBs
Position
5879474..5879989
Genome browser
AA seq
171 aa
AA seq
DB search
MSSDHPLDHAAIGQLYHAHHAWLRGWLSRRTGCREHAADLAQETFVRLLNARRQQTLQQP
RAYLSSIARSLMIDQYRRRELERAYLESLAHFPQIEVPSEETRLLILDSLERIDRLLDQL
KPRVREAFLLAQLDGLTCAQIALRLGVSKATVERDLSKALHACYRLRYVEN
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgatcacccactggaccatgccgccatcggccagctttaccatgcccatcat
gcctggctgcgcggctggttgagccgccgcaccggctgccgcgaacacgccgccgacctg
gcccaggaaaccttcgtgcgcctgcttaatgcgcgcaggcagcaaaccttgcagcagccg
cgcgcgtacttgagcagcatcgcccgcagcctgatgatcgaccaataccgccgccgcgaa
ctggagcgcgcctacctggaaagcctcgcgcacttcccgcaaatcgaggtgccgtcggaa
gaaacccgcctgttgatcctcgacagcctggaacgtatcgaccgtctgctcgaccagctc
aagccgcgcgtgcgcgaagcctttttgctggcgcaactggatggcctgacttgcgcacag
atcgccctgcgtctcggcgtgtccaaggccacggtggaacgggacctgtccaaggcgctg
cacgcgtgttaccggttgcgttatgtcgaaaactga
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