KEGG   Pandoraea faecigallinarum: AB870_00845
Entry
AB870_00845       CDS       T03972                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pfg  Pandoraea faecigallinarum
Brite
KEGG Orthology (KO) [BR:pfg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfg03032]
    AB870_00845
   03036 Chromosome and associated proteins [BR:pfg03036]
    AB870_00845
   03400 DNA repair and recombination proteins [BR:pfg03400]
    AB870_00845
DNA replication proteins [BR:pfg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AB870_00845
Chromosome and associated proteins [BR:pfg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AB870_00845
DNA repair and recombination proteins [BR:pfg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AB870_00845
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 2C_adapt
Other DBs
NCBI-ProteinID: AKM28989
UniProt: A0A0H3WM77
LinkDB
Position
complement(2835246..2835518)
AA seq 90 aa
MNKTELIDHISEQADISKAASGRALDAFVGAVKKALKKGDDVTLVGFGTFFVNKRAARTG
RNPRTGEAIKIKAAKVPKFRPGKDLKDNVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataagacggaactgatcgatcacatctcggaacaggcagacatttcgaaagctgcg
tccggacgagcacttgacgcattcgtaggggcagtaaagaaagcgctgaagaagggtgac
gatgtgacgctggttggctttgggactttcttcgtcaacaagcgcgccgcccgcacgggc
cgcaatccgcgcactggcgaggccatcaagatcaaggcggccaaagttccgaaatttcgc
cctggcaaagatctcaaagataatgtaaactaa

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