Pandoraea faecigallinarum: AB870_01880
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Entry
AB870_01880 CDS
T03972
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfg
Pandoraea faecigallinarum
Pathway
pfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB870_01880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfg03019
]
AB870_01880
03016 Transfer RNA biogenesis [BR:
pfg03016
]
AB870_01880
Enzymes [BR:
pfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB870_01880
Messenger RNA biogenesis [BR:
pfg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB870_01880
Transfer RNA biogenesis [BR:
pfg03016
]
Prokaryotic type
tRNA degradation factors
AB870_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH_KhpA-B
KH-I_KHDC4-BBP
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AKM29138
UniProt:
A0A0H3WRG0
LinkDB
All DBs
Position
complement(3093740..3095899)
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AA seq
719 aa
AA seq
DB search
MQMFNKVVKSFQWGQNTVRMETGEIARQASGAVLVDMDDTVVLATVVGAKKAKAGQDFFP
LTVDYLEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPIRPLFPEGFYNEVQVVVQVV
SLNPEVPADIPALIGASAALAISGLPFNGPVGAARVAYIDSQYVLNPSREQIAKSKLDLV
VAGTEQAVLMVESEAQELPEDVMLGAVVFGHEQMQTAINAIHDLVRDGGKAEWEWAPAAK
NDALIAQVTELAEGPLRAAYQTREKQARTQQLRTVSADVIAKLGEAAAAKGEAAPDEIEV
GNILFDLEAKIVRSQILAGEPRIDGRDTRTVRPITIRTGVLPRAHGSALFTRGETQALVV
ATLGTKSDEQIIDALQGEYRDRFMLHYNFPPFSTGETGRVGSPKRREIGHGRLAKRALVA
CLPGADDFGYTVRVVSEITESNGSSSMASVCGGSLAMMDAGVPLTSPVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTSNGVTALQMDIKIQGITKEIMQVALAQAKEGRLHI
LGKMSEAQSGVRTELSEFAPRMVTIKINPEKIRDVIGKGGSVIRALTEETGTSIDISDDG
VVTIASPSAEGIAEAKRRIELITVEVEVGQVYDGTVLKLLEFGAIVSVLPGKDGLLHISE
IANERIKDINEYVKEGQAVRVKVIQQDDKGRLRLSHKALTEEEKQGGPLLARREGGDAQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaatgttcaataaagtcgtgaagtctttccagtggggacaaaacacggttcgcatg
gagaccggtgagattgctcgccaggcctccggtgccgtgctcgtcgacatggacgatacc
gtggtgctcgccacggtcgtgggcgcgaagaaggccaaggctggccaggacttcttcccg
ctgacggtcgactatctggaaaagacttacgccgccggcaagatcccggggggcttcttc
aagcgtgaaggccgtccgtcggaaaacgaaacgctgacgtcgcgcctgatcgatcgtccg
atccggccgctgttcccggaaggcttctacaacgaagtccaggtcgtggtgcaggtcgtc
tcgctgaacccggaagtgccggcagacatcccggccctgatcggcgcttcggccgcgctg
gccatctcgggcctgccgttcaacggcccggtcggcgctgcacgcgttgcctacatcgac
agccagtacgtactgaacccgtcgcgtgagcagattgccaagtcgaagctcgacctggtt
gtcgcgggaacggagcaagctgtgctgatggtggaatcggaagcgcaggaactgccggaa
gacgtgatgctgggcgccgtggtgttcggtcacgagcaaatgcaaacggcgatcaacgcg
atccacgatctggtgcgtgacggtggcaaggccgagtgggaatgggccccggccgccaag
aacgacgcgctgatcgcgcaagtgaccgaattggccgaaggtccgctgcgcgctgcttat
caaacgcgcgaaaagcaagcccgtacgcaacaactgcgtaccgtgagcgccgacgtcatc
gccaagctgggcgaagccgctgccgccaagggcgaagcggcaccggacgaaatcgaagtc
ggcaacatcctgttcgatctggaagccaagatcgtgcgtagccagattctggctggcgag
ccgcgtatcgacggtcgcgacacgcgtaccgtgcgtccgatcacgatccgtaccggcgtg
ctgccgcgtgctcatggctcggccctgttcacgcgtggcgagacgcaagcactcgtagtg
gccacgctgggcaccaagagcgacgagcagatcatcgacgcgttgcaaggcgagtaccgt
gatcgcttcatgctgcactacaacttcccgccgttctcgacgggcgaaacggggcgcgtg
ggttcgcccaagcgtcgcgaaatcggtcacggccgtctggccaagcgtgccctggtggcg
tgcctgccgggcgccgacgatttcggctataccgtgcgagtcgtgtcggaaatcaccgaa
tcgaacggttcgtcgtcgatggcttcggtctgcggcggcagcctcgcgatgatggacgcc
ggtgtgccgctgacctcgccggtcgccggtatcgccatgggcctgatcctcgaaggcaac
aagtttgccgtgctgaccgacattctcggcgacgaagatcacctgggcgacatggacttc
aaggtggccggtacgtcgaacggcgtgactgcgctccagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctggcgcaagccaaggaaggccgtctgcacatc
ctcggcaagatgtcggaagcgcagtccggtgtccgcacggagctgtcggagttcgcgccg
cgcatggtcacgatcaagatcaatccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgattcgtgcgctgacggaagaaaccggtacgagcatcgatatctcggacgatggc
gtggtcaccattgccagcccgagcgccgaaggcattgccgaagcgaagcgccgtatcgaa
ctgattacggtggaagtcgaagtcggtcaggtctacgacggcactgtgctcaagctgctt
gagtttggcgcgatcgtctcggtgctgccgggcaaggacggcttgctgcatatctcggaa
atcgccaacgagcgcatcaaggacatcaacgagtacgtcaaggaaggtcaggccgtgcgc
gtgaaggtgatccagcaggacgacaagggtcgcctgcgtctgtcgcacaaggcgttgacc
gaagaagagaagcagggcggtccgctgctggccaggcgtgaaggcggcgacgcgcagtaa
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