Pandoraea faecigallinarum: AB870_02985
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Entry
AB870_02985 CDS
T03972
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfg
Pandoraea faecigallinarum
Pathway
pfg03420
Nucleotide excision repair
pfg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB870_02985
03430 Mismatch repair
AB870_02985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfg03400
]
AB870_02985
Enzymes [BR:
pfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB870_02985
DNA repair and recombination proteins [BR:
pfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB870_02985
MMR (mismatch excision repair)
Other MMR factors
AB870_02985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKM29319
UniProt:
A0A0H3WN16
LinkDB
All DBs
Position
complement(3324039..3326357)
Genome browser
AA seq
772 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQQGHVGPAGILAVTF
TNKAAKEMQARLGAMLPVSTRAMWIGTFHGLCNRMLRAHFRDAGLPQGFQILDQSDQLSA
IKRMMKAANVDDEKFPPKNLQYFINNAKEQGLRPHEVEANDAFNQKFVELYASYQEQCQR
EGVVDFAELLLRCFELLKHNEPLRAHYQSRFRHILVDEFQDTNKLQYAWLKMLAGSQGAV
FAVGDDDQSIYAFRGANVGNMADFEREFRVRHLIKLEQNYRSHGNILDAANALISNNARR
LGKNLRTDAGHGEPIRVYEAATDLQEASWLVEEIKALVAQGLSRQDVAILYRSNAQSRVM
EHALVGAGIAYRVYGGLRFFERQEVKHALAYLRLIENPNDDTAFARVVNFPTRGIGARSL
EQLADAARLYNCSMYAAVPYMTGKAGTNLLAFVRMIEQMRHDTERLTLPEVVTHVIDASG
LIAHYQTEKEGQDRIENLQELVHAATAFIAEEGYGLDAPARLIATRPALPGAPDMLVSPD
GVVDADTPVEMTPLAGFLSHASLEAGDNQAEAGQDAVQLMTVHAAKGLEFTAVFVTGLEE
GLFPHENSAMELDGLEEERRLMYVAITRAKERLYLSFTQSRMLHGQTRYNLRSRFFDEIP
EEVLKFLTPRAQPGARLAQAEPAWGRDWFARAQVSAPKDEWAATKSEKALADRSRASETG
FKLGQGVFHTKFGEGKIIGLEGTGDEARAHVKFGRHGEKWLALAVAKLQPIE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaacctgaaccccgaacaactggccgccgtcacgcttcccgac
gagccggccctcattctcgcgggcgcgggttccggcaagacgcgtgtgctcacgacccgt
atcgcctggctgatccagcagggacacgtcggcccggcgggcattctggcggtgaccttt
accaacaaggcggccaaggaaatgcaggcccgtctgggtgcgatgcttccggtcagcacg
cgcgccatgtggatcggcacgttccacgggctgtgcaaccgtatgctgcgcgcgcatttc
cgggacgccgggctgccgcagggttttcagatccttgaccagtccgaccagctttccgcc
atcaaacgcatgatgaaggcggcgaatgtggacgacgagaagtttccgcccaagaatctc
cagtatttcatcaacaacgccaaggaacagggtctgcggccccatgaggtcgaggccaac
gacgcgttcaaccagaagttcgtggagctttacgcgagctatcaggagcaatgccagcgc
gaaggggtggtcgacttcgccgaactgctgctgcgctgcttcgaactgctcaaacataac
gaaccgctgcgagcgcactaccagtcacgctttcgccacatcctcgtcgacgagttccag
gacaccaacaaactccagtacgcgtggctcaaaatgctcgccggctcgcaaggggcggtg
tttgccgtgggcgacgacgatcagagcatctacgcgtttcgtggcgccaacgtcggcaat
atggctgacttcgagcgcgaattccgcgttcgccacctcatcaagctggagcagaactac
cgctcacacggcaatattctcgatgcggccaatgcgctgatttcgaacaatgcccggcgt
ctgggcaagaacctgcgcacggacgcgggacacggcgagccgattcgcgtgtacgaggcg
gccaccgatctgcaagaggcgagctggctcgtggaggagatcaaggcactggtcgcgcaa
gggctgtcgcgtcaggacgtcgccatcctttaccgcagcaatgcgcagtcgcgcgtcatg
gagcatgcgctggtgggggcgggcattgcgtaccgcgtgtacggcggtctgcgctttttc
gagcgtcaggaagtcaagcatgcgctcgcctatctgcgtctgatcgagaatccgaacgac
gatacggcgttcgcgcgcgtcgtcaatttccccacgcggggcatcggcgcgcgttcgctg
gagcaactcgccgacgcggcgcgcctgtacaactgttcgatgtacgccgccgtgccttac
atgacgggcaaggcgggcacgaatctgctggcgttcgtgcggatgatcgagcagatgcgg
cacgacacggagcggttgacgttgccggaagtcgttacgcacgtgatcgacgcgagcggc
ctcattgcacattaccagaccgagaaggaaggtcaggatcgcatcgagaacttgcaggaa
ctcgtgcatgcggcgacggcgttcatcgccgaagaggggtatggactcgacgccccggcg
cggctgattgcaacgcgcccggcgctgcccggggcgccggacatgctcgtctcgcccgat
ggggtggtggacgccgatacgccggtcgagatgacgccgttggcgggcttcctgtcgcac
gcgtcgctcgaagccggggacaatcaggccgaggccgggcaggacgccgtgcagttgatg
acggtgcacgcggcaaaggggctcgaattcacggcggtgttcgtcaccggcctcgaagaa
ggactgttcccgcacgaaaacagcgcgatggagcttgatggacttgaagaggagcgacgt
ctgatgtacgtggcgattacgcgcgccaaggagcgtctgtacctgtcgttcacccagagc
cgcatgctgcatggccagacgcgctacaacttgcgctcacgattcttcgacgaaattccc
gaggaagtgctgaagttcctgacaccgcgagcgcagccgggcgcgcgtctggctcaggcg
gaaccggcatgggggcgcgattggtttgcccgtgcgcaggtaagcgcaccgaaggatgaa
tgggcggcgacgaagtcggaaaaggcgctggcagatcgttcgcgtgcgtcggagaccgga
ttcaagctggggcagggcgttttccacaccaagttcggcgaaggcaagatcatcggactc
gaaggcacgggcgatgaagcccgcgcgcacgtgaagttcggtcgtcacggtgaaaagtgg
ctggcgctggccgttgcgaaactgcagccgatcgagtga
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