Pandoraea faecigallinarum: AB870_09110
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Entry
AB870_09110 CDS
T03972
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfg
Pandoraea faecigallinarum
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfg03000
]
AB870_09110
Transcription factors [BR:
pfg03000
]
Prokaryotic type
Helix-turn-helix
Other families
AB870_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
HTH_30
PAS_4
AAA_5
HTH_50
HTH_7
HTH_23
PAS_9
HTH_22
HTH_29
HTH_38
HTH_28
AAA_16
HTH_20
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
AKM30228
UniProt:
A0A0H3WUF2
LinkDB
All DBs
Position
complement(4702195..4704219)
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AA seq
674 aa
AA seq
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MPPTHEAAHARRVLNVAQGHWPSGTAATDPNIASSWRRCLDMYALDPGARMSPRVLASSQ
LRERRNAMERLRSVSLPVLERLQRQLMNPRQAVLLTAPDGVIVESRLHDGTREDFHRAGL
WPGADWSESCEGTNGIGTCVVERAPVIICQQDHFRALHTPLTCTASPVFAPQGDLLAVID
VSSTTADVTRQSQFHTLALVNLSAKVVESEYFFQHYRDEWLLQLQEQADHLGGFAQALLA
FDDAGRVLAANQSALNCLGATRDEIVGTRVDRWFAHTLDTLFAQAHRSPAACWPIRTNAG
EPLLAMLRAPSRVVRRAPNPTGAPGMPAHADTAREPTVAPFADPALAREFSRACRVFAHD
VPVLIRGETGSGKEVFARAVHAASARASGPFVALNCAAIPESLIESELFGYVGGSFTGAR
KEGMNGKLWQANGGTLFLDEIGDMPFAMQTRLLRVLEERMVSPLGGGEPMPLDIRVLSAT
HRDLPARIAEREFREDLFYRLNGLEVSVPPLREREDEVDLIERLLAQASVQAPDSPTHVT
DAARACLCRYTWPGNVRQLRSVIRTLVALSENGVITLDDLPAELREAAMMPPVGGAADAA
GGAYVGEATGAMGTTAATKVMEAAVEAPLEAAERQALRAALDACHGQVSATARRLGVSRN
TLYRKLRRFGLLRG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccacccactcatgaagctgcgcacgcgcgccgtgtgctgaatgtcgcgcagggccac
tggccgtcgggaaccgcggcgacggacccgaatatcgccagctcctggcgccgctgtctg
gacatgtacgcgctcgatccgggcgcgcgcatgtcgccccgtgtgctggcgtcgtcgcag
ctgcgcgagcggcgcaatgccatggagcggttgcgcagcgtttccctgcccgtattggag
cgtttgcagcgccagttgatgaacccgcgtcaggcggtgctgctgaccgctccggatggc
gtgatcgtcgagtcgcgactgcacgacggcacgcgcgaggacttccatcgggcagggttg
tggccgggcgcggactggagcgagtcgtgcgaaggtacgaacggcatcggcacgtgtgtc
gtggagcgcgcgccggtcatcatctgccagcaggatcactttcgtgcgctgcatacgccg
ctgacgtgcacggcgagccccgtcttcgccccgcagggagatctgctcgcggtgatcgac
gtgtcgtcgaccacggccgacgtcacccgccagagtcagtttcatacgctcgccctcgtc
aacctgtcagcgaaagtcgtggagagcgagtacttctttcagcactatcgcgacgagtgg
ttattgcaattgcaggagcaggccgatcacctcggcggcttcgcgcaggcgctgctcgcg
ttcgacgacgcggggcgagtgctggcggcgaatcaaagcgcgttgaattgtctgggggca
acgcgcgacgagatcgtgggcacgcgcgtggaccggtggtttgcgcatacgctcgacacg
ttgttcgcgcaagcccatcgctcgccggccgcctgctggccgattcgcacgaacgccggc
gagccgctgctggcaatgttgcgcgcgccctcacgtgtcgttcgccgcgcgccgaatccg
acgggcgcgccgggcatgccggcgcacgcggatacggcgcgcgaaccgacggtggcgcct
ttcgccgatccggcgctcgcgcgcgaattctcgcgtgcatgccgcgtattcgcgcacgac
gtgccggtactcatccggggtgagacgggcagcgggaaggaggtatttgcgcgtgccgtc
catgcggcaagtgcgcgcgcgagcgggccgttcgtcgcgttgaattgcgcggcgattccg
gagtcgctgatcgagagcgagttgttcggctatgtgggcggcagcttcacgggtgcgcgc
aaggagggaatgaacggcaagctgtggcaggcgaatggcggcacgttgttcctcgatgag
atcggcgatatgccgtttgcgatgcagacgcggctgctgcgtgtgctggaggagcgaatg
gtgtcgccgctcggcggcggagaacccatgccgctggacattcgcgtactcagtgccacg
caccgcgatctgccggcccgcattgccgagcgagagtttcgcgaggacctgttctatcgt
ctgaatggactggaagtgtcggtgccgccgttgcgcgagcgcgaggacgaggtcgatctg
atcgagcgcctgttggcgcaggcgagcgtgcaagcgcccgacagcccgacgcatgtcacg
gacgccgcgcgtgcgtgcctatgccgctatacgtggccggggaacgtacgtcagctgcgc
agcgtgattcgaacgctcgtggcgctgagcgagaacggggtgatcacattggacgatctg
ccggccgagctgcgcgaagccgcgatgatgccgccggtgggcggggcggcggatgcggcg
ggcggcgcgtacgtgggcgaagcgacgggcgcgatgggaacgacggcagcgacgaaagtg
atggaggcggcggtggaagcgccgttggaggcggcggagcgtcaggcgttgcgcgccgcc
ctcgacgcctgtcacgggcaagtcagcgccacggcacgtcgtctcggggtgagtcgtaac
acgctgtaccggaagctccggcgcttcgggttgctgcgcggctga
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