Pandoraea faecigallinarum: AB870_10395
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Entry
AB870_10395 CDS
T03972
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pfg
Pandoraea faecigallinarum
Brite
KEGG Orthology (KO) [BR:
pfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfg03400
]
AB870_10395
DNA repair and recombination proteins [BR:
pfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AB870_10395
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Spc110_C
DUF4832
Motif
Other DBs
NCBI-ProteinID:
AKM30427
UniProt:
A0A0H3WRI2
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All DBs
Position
4984802..4985212
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AA seq
136 aa
AA seq
DB search
MTDRLNSDQRRHLMQQVKGKNTRPEMIVRSLLHRLGYRFRLHRKDLPGTPDVVFPSRRVA
LFVHGCFWHGHGCRIGQLPKSRLDYWQPKIATNRDRDARKEAALEATGWRVAVVWQCELT
DLEGLATRLKDLLDTK
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
ttgacagaccgtctgaattccgatcaacgccgacacctcatgcaacaggtgaaaggcaag
aatacgcggccagagatgattgttcgctcgctgctgcatcgcctcggctatcgctttcga
ctccatcggaaagacctgccaggaacgcccgatgtggtcttcccgagccggcgcgtcgcg
ctgtttgtgcacggctgcttctggcacggccatggttgccgcatcggtcaactaccgaag
tcgcgcctcgactactggcaaccgaaaattgccaccaatcgcgaccgggatgctcgaaag
gaggctgcacttgaggcgaccggctggcgtgtggccgtcgtctggcaatgtgagctgacc
gatctcgaagggctggcaacgcgcctgaaggacctgctcgacacgaagtga
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